| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 595628 = | 12 (0.520) | 3 (0.130) | 3/242 | NT | 19.6% | coding (529/1266 nt) | PP_0506 | ABC transporter permease |
| ? | NC_002947 | 595675 = | 13 (0.580) | coding (482/1266 nt) | PP_0506 | ABC transporter permease | |||||
TGGGTGACAAGCTGGTGCTGGCCCACGGCGTGGCCGCAATCAGTCTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/595678‑595628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaCCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTGGCGGC > NC_002947/595675‑595777 TGGGTGACAAGCTGGTGCTGGCCCACGGCGTGGCCGCAATCAGTCTGGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAG > 1:565425/1‑92TGGGTGACAAGCTGGTGCTGGCCCACGGCGTGGCCGCAATCAGTCTGGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAG < 2:565425/92‑1 TGACAAGCTGGTGCTGGCCCACGGCGTGGCCGCAATCAGTCTGGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTGGCGGC > 1:355860/1‑150 TGGGTGACAAGCTGGTGCTGGCCCACGGCGTGGCCGCAATCAGTCTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/595678‑595628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaCCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTGGCGGC > NC_002947/595675‑595777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |