New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 807388 | 26 (1.120) | 3 (0.130) | 3/242 | NT | 10.5% | coding (649/708 nt) | PP_0694 | hypothetical protein |
? | NC_002947 | = 807416 | 26 (1.160) | coding (621/708 nt) | PP_0694 | hypothetical protein |
TACCGACAGCGGGTGCTCCAGCGGGAACAGGCCAAGGCTGTAGCCGGCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/807237‑807388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctCGACCTCACGCCTTTCCAGGGCGAGGAAAGCGAAGAG < NC_002947/807416‑807380 TACCGACAGCGGGTGCTCCAGCGGGAACAGGCCAAGGCTGTAGCCGGCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTCG < 2:588107/150‑1 CGACAGCGGGTGCTCCAGCGGGAACAGGCCAAGGCTGTAGCCGGCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTC < 1:490674/146‑1 CGACAGCGGGTGCTCCAGCGGGAACAGGCCAAGGCTGTAGCCGGCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTC > 2:490674/1‑146 GTAGCCGGCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTCGCTCGACCTCACGCCTTTCCAGGGCGAGGAAAGCGAAGAG < 2:155073/150‑1 GCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTCGCTCGACCTCACGCCTTTCCAGGGCGAGGAAAGCGAAGA > 1:104548/1‑142 GCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTCGCTCGACCTCACGCCTTTCCAGGGCGAGGAAAGCGAAGA < 2:104548/142‑1 TACCGACAGCGGGTGCTCCAGCGGGAACAGGCCAAGGCTGTAGCCGGCGGTGTTGAGCAATGCGAAGCGGCGGATGCCGTAGCGTTCCTGGCTCATGCGTCAATCTCCTGTTGCTCTTCGCGGATGGCCCGGGCCAGGGCGTCCTCTTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/807237‑807388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctCGACCTCACGCCTTTCCAGGGCGAGGAAAGCGAAGAG < NC_002947/807416‑807380 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |