New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1251009 =	18 (0.780)	3 (0.140)	3/234	NT	16.7%	coding (268/549 nt)	PP_1093	electron transport complex protein
	?	NC_002947	1251060 =	13 (0.600)					coding (217/549 nt)	PP_1093	electron transport complex protein

TGCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1251165‑1251009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggccaAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGT  >  NC_002947/1251060‑1251201                                                                                                                                                                                                                                                                                                             TGCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCA                                                                                                                                                       >  2:408192/1‑150                                                        ACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGC                                                                                                                                                  <  1:439565/100‑1                                                        ACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGC                                                                                                                                                  >  2:439565/1‑100                                                                                                          TTGACCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGT                                              >  1:150200/1‑150                                                                                                               CAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCC                                                                                                 >  1:605443/1‑94                                                                                                               CAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCC                                                                                                 <  2:605443/94‑1                                                                                                                                                      ACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCTGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGT  <  1:221004/150‑1                                                                                                                                                        TGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGT                                                                   >  1:230869/1‑83                                                                                                                                                        TGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGT                                                                   <  2:230869/83‑1                                                                                                                                                                                                                                                                                                             TGCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1251165‑1251009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggccaAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGT  >  NC_002947/1251060‑1251201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.