New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1745822 = | 24 (1.040) | 5 (0.230) | 5/240 | NT | 17.5% | intergenic (‑20/+299) | PP_1543/PP_1544 | hypothetical protein/hypothetical protein |
? | NC_002947 | 1745847 = | 24 (1.080) | intergenic (‑45/+274) | PP_1543/PP_1544 | hypothetical protein/hypothetical protein |
TCCGAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1745974‑1745822 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAGGAGGTATGTATGGCTTGGTATCACCGCGACAGTGATGTTAAGAAGAGCAC > NC_002947/1745847‑1745968 TCCGAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGC > 1:549488/1‑150 GAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGCGGC > 2:561784/1‑150 TGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCGCCCTCCGTGGC‑CGGA‑TGCGGCATGGTGGCTGTTTAAAAT < 1:322825/146‑1 TGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCGCCCTCCGTGGC‑CGGA‑TGCGGCATGGTGGCTGTTTAAAAT > 2:322825/1‑146 CATGCCG‑CATCCG‑GCCACGGAGGGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCAGTGATTTAGTTGGGGCTCAATACAGAAGGAGGTATGTATGGCTTGGTATCACCGCGACAGTGATGTTAAGAAGAGCAC > 1:18362/1‑150 ATGCCG‑CATCCG‑GCCACGGAGGGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTT < 1:384403/64‑1 ATGCCG‑CATCCG‑GCCACGGAGGGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTT > 2:384403/1‑64 TCCGAAGTGCTCTTCTTAACATCACTGTCGCGGTGATACCAAGCCATACATACCTCCTTCTGTATTGAGCCCCAACTAAATCACGGCAGGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCG‑CATCCG‑GCCACGGAGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1745974‑1745822 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAGGAGGTATGTATGGCTTGGTATCACCGCGACAGTGATGTTAAGAAGAGCAC > NC_002947/1745847‑1745968 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |