New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1770930	19 (0.820)	5 (0.220)	5/248	NT	23.3%	coding (1636/3000 nt)	PP_1579	hypothetical protein
	?	NC_002947	= 1770977	14 (0.610)					coding (1683/3000 nt)	PP_1579	hypothetical protein

GCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1770833‑1770930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAG  <  NC_002947/1770977‑1770926                                                                                                                                                        GCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAG  <  1:122704/150‑1           GACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGG          >  1:577139/1‑132           GACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGG          <  2:577139/132‑1                                  GCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGC             >  2:414859/1‑106                                  GCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTGCTATCCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGC             <  1:414859/106‑1                                                                                                                                                        GCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1770833‑1770930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAG  <  NC_002947/1770977‑1770926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.