New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1770930 | 19 (0.820) | 5 (0.220) | 5/248 | NT | 23.3% | coding (1636/3000 nt) | PP_1579 | hypothetical protein |
? | NC_002947 | = 1770977 | 14 (0.610) | coding (1683/3000 nt) | PP_1579 | hypothetical protein |
GCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1770833‑1770930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAG < NC_002947/1770977‑1770926 GCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAG < 1:122704/150‑1 GACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGG > 1:577139/1‑132 GACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGG < 2:577139/132‑1 GCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGC > 2:414859/1‑106 GCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTGCTATCCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGC < 1:414859/106‑1 GCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1770833‑1770930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAG < NC_002947/1770977‑1770926 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |