New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1770930	19 (0.820)	5 (0.220)	5/248	NT	23.3%	coding (1636/3000 nt)	PP_1579	hypothetical protein
	?	NC_002947	= 1770977	14 (0.610)					coding (1683/3000 nt)	PP_1579	hypothetical protein

TTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGCACAACCTGCAGAGCAACACCGAAGACGCCATCGGCTTCACCTTCCGCAAGACCCTGCCGTA  >  NC_002947/1770835‑1771105                                                                                                                                               |                                                                                                                                 ttGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGc                                                                                                                           <  1:335381/150‑1 (MQ=255) ttGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGc                                                                                                                           <  2:227331/150‑1 (MQ=255)            ggggCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGTAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTtc                                                                                                                <  2:414120/150‑1 (MQ=255)               gCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTtcgtc                                                                                                             <  2:205312/150‑1 (MQ=255)                      cccTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGgc                                                                                                      >  1:325490/1‑150 (MQ=255)                                  ttGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGTCCTGGTACAAGAGCAACGGCCACCGCCGGGAGGGCTGGCTGAACGGGTTCGTCGAGTGGCGCGATGCGGCaa                                                                                          >  1:348742/1‑150 (MQ=255)                                   tGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAAt                                                                                         <  2:333113/150‑1 (MQ=255)                                                   gTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGAcc                                                                         <  1:67792/150‑1 (MQ=255)                                                               gAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGcac                                                             <  2:325490/150‑1 (MQ=255)                                                                     aCCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGCACAACCTg                                                       <  1:545490/150‑1 (MQ=255)                                                                                  aGTACGACTTCTATCTGCGCGGCGGCTGTGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGCACAACCTGCAGAGCAACACCg                                          >  1:300157/1‑150 (MQ=255)                                                                                            cTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGgatagaagtcgtactcgatggtgtcggtcagctcctgctctggcaccgccatgaacggcccaagccagtccagggtggaagccccgtccgcaccaagc                                <  1:122704‑M2/150‑99 (MQ=255)                                                                                                    ccGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCAgatagaagtcgtactcgatggtgtcggtcagctcctgctctggcaccgccatgaacggcccaagccagtccagggtggaagccccgtc                                          >  1:577139‑M2/1‑44 (MQ=255)                                                                                                    ccGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCAgatagaagtcgtactcgatggtgtcggtcagctcctgctctggcaccgccatgaacggcccaagccagtccagggtggaagccccgtc                                          <  2:577139‑M2/132‑89 (MQ=255)                                                                                                       gcggcTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGgatagcagtcgtactcgatggtgtcggtcagctcctgctctggcaccgccatgaacggcccaagc                                                                 <  1:414859‑M2/106‑66 (MQ=255)                                                                                                       gcggcTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGgatagaagtcgtactcgatggtgtcggtcagctcctgctctggcaccgccatgaacggcccaagc                                                                 >  2:414859‑M2/1‑41 (MQ=255)                                                                                                            ttGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGCACAACCTGCACAGCAACACCGAAGACGCCATCCGCTTCACCTTCCGc                >  2:61299/1‑150 (MQ=255)                                                                                                                ccTGGTACAAGCGCACCGGCCCCCGCGGGGTGAGCGCTCTGAACCCGTTCGGCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGCACAACCTGCAGAGCAACACCGAAGACGCCATCGGCTTCACCTTCCGCAAGa            <  2:468762/150‑1 (MQ=255)                                                                                                                          gagCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGCACAACCTGCAGAGCAACACCGAAGACGCCATCGGCTTCACCTTCCGCAAGACCCTGCCGTa  >  2:218652/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                 TTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGCTTGGCCTGGTACAAGAGCAACGGCCACCGCCGGGCGGGCTCGCTGAACGTGTTCGTCGAGTGGCGCGATGCGGCAATTGGCGGAGCGTGGACCCGAGAGGTGCACAACCTGCAGAGCAACACCGAAGACGCCATCGGCTTCACCTTCCGCAAGACCCTGCCGTA  >  NC_002947/1770835‑1771105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.