New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2053804 | 22 (0.950) | 3 (0.140) | 3/240 | NT | 12.0% | coding (865/960 nt) | PP_1829 | alpha/beta family hydrolase |
? | NC_002947 | = 2053828 | 23 (1.040) | coding (841/960 nt) | PP_1829 | alpha/beta family hydrolase |
AGCTATGCCTGCTGTATCGGCAGGCATGGCTGAGACCTGAGCCTGTTTGACTTACGCCGAAGGCAAATGCTGGATGAACGTCACAATTCGCTCGCCCAGCTCACGCGCCAGCGGCAGCTCGGGGTTGAGGTAGCTGTCGCGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2053658‑2053804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgCGCATCAGCCCCAAGGGCATGAGCCAGCAGCGC < NC_002947/2053828‑2053796 AGCTATGCCTGCTGTATCGGCAGGCATGGCTGAGACCTGAGCCTGTTTGACTTACGCCGAAGGCAAATGCTGGATGAACGTCACAATTCGCTCGCCCAGCTCACGCGCCAGCGGCAGCTCGGGGTTGAGGTAGCTGTCGCGCTGCTGCGC > 1:216107/1‑150 TGAGACCTGAGCCTGTTTGACTTACGCCGAAGGCAAATGCTGGATGAACGTCACAATTCGCTCGCCCAGCTCACGCGCCAGCGGCAGCTCGGGGTTGAGGTAGCTGTCGCGCTGCTGCGCATCAGCCCCAAGGGCATGAGCCAGCAGCGC < 2:216107/150‑1 CAGCTCACGCGCCAGCGGCAGCTCGGGGTTGAGGTAGCTGTCGCGCTGCTGCGCATCAGCCCCAAGGGCATGA > 1:171986/1‑73 CAGCTCACGCGCCAGCGGCAGCTCGGGGTTGAGGTAGCTGTCGCGCTGCTGCGCATCAGCCCCAAGGGCATGA < 2:171986/73‑1 AGCTATGCCTGCTGTATCGGCAGGCATGGCTGAGACCTGAGCCTGTTTGACTTACGCCGAAGGCAAATGCTGGATGAACGTCACAATTCGCTCGCCCAGCTCACGCGCCAGCGGCAGCTCGGGGTTGAGGTAGCTGTCGCGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2053658‑2053804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgCGCATCAGCCCCAAGGGCATGAGCCAGCAGCGC < NC_002947/2053828‑2053796 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |