| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2446426 = | 19 (0.820) | 3 (0.140) | 3/240 | NT | 13.9% | coding (657/708 nt) | PP_2144 | TetR family transcriptional regulator |
| ? | NC_002947 | 2446446 = | 19 (0.860) | coding (677/708 nt) | PP_2144 | TetR family transcriptional regulator | |||||
AGGCCCTGCGGGCGATTGCCGAGACCGACTTCGGCATCAACACCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCTACTTCGCATCTCCCTTGCTGACCAGTGCCTGTATGG > NC_002947/2446293‑2446570 | aGGCCCTGCGGGCGATTGCCGAGACCGACTTCGGCATCAACACCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCCTACGCGCTGACAGCGGTGTGACCGACGAGGCGGTGGCCACTGCGCAGCTGCGCCcgc > 1:315579/1‑150 (MQ=255) ggCGATTGCCGAGACCGACTTCGGCATCAACACCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGAc < 2:495899/150‑1 (MQ=255) ttGCCGAGACCGACTTCGGCATCAACACCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGtt > 1:370810/1‑150 (MQ=255) ttCGGCATCAACACCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAg > 2:250544/1‑150 (MQ=255) cATCAACACCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTg > 1:58512/1‑150 (MQ=255) acacCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCTTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGACCTGAAGGc > 1:276257/1‑150 (MQ=255) ccTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTgg < 1:350969/150‑1 (MQ=255) tcgatcgaGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGc > 1:371907/1‑150 (MQ=255) tcgaGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTgg < 2:58512/150‑1 (MQ=255) aGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCgg < 1:455851/150‑1 (MQ=255) gCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCggg < 2:371907/150‑1 (MQ=255) gcgctagcttagcggaagcgccccgccacgcccagccttcaggccttggcggtagccgaaccggtctttgTGCGCAGCTGCGCCCGCGCACaaa > 1:251852‑M1/71‑94 (MQ=255) gcgctagcttagcggaagcgccccgccacgcccagccttcaggccttggcggtagccgaaccggtctttgTGCGCAGCTGCGCCCGCGCACaaa < 2:251852‑M1/24‑1 (MQ=255) gTGCCGTTCCTGGCGGCAGGCCTGCGCGCTCACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAgc > 2:172330/1‑150 (MQ=255) aTGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCTCTGCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCt > 1:494390/1‑150 (MQ=255) aTGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCt > 1:185936/1‑150 (MQ=255) gCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCaa > 1:263086/1‑73 (MQ=255) gCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCaa < 2:263086/73‑1 (MQ=255) tgtgACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCTACTTCGCATCTCCCTTg > 2:526633/1‑150 (MQ=255) aCCGACGAGGCGATGGCCACTGAGCAGCTGCGCCCGCGCACAAAGACCGGTGCGGCTACCGCCAAGGCCTGAAGGCTGGGCGGGGCGGGGCGCGTCCGCTAAGGTAGCGCCCATGCCCGATTTCGAGCTACTTCAGATCTCCCTTGCTGa > 1:295723/1‑150 (MQ=255) gtagccgaaccggtctttgTGCGCGGGCGCAGCTGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCTACTTCGCATCTCCCTTGCTGAc < 2:202678‑M1/131‑1 (MQ=255) ccGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCTACTTCGCATCTCCCTTGCTGAc > 1:231457/1‑150 (MQ=255) gCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCTACTTCGCATCTCCCTTGCTGACCAGTGCCTGTATgg < 1:172330/150‑1 (MQ=255) | AGGCCCTGCGGGCGATTGCCGAGACCGACTTCGGCATCAACACCTCGATCGAGCAGGTGATGCGCCTGATGGTGCCGTTCCTGGCGGCAGGCATGCGCGCTGACAGCGGTGTGACCGACGAGGCGATGGCCACTGCGCAGCTGCGCCCGCGCACAAAGACCGGTTCGGCTACCGCCAAGGCCTGAAGGCTGGGCGTGGCGGGGCGCTTCCGCTAAGCTAGCGCCCATGCCCGATTTCGATCTACTTCGCATCTCCCTTGCTGACCAGTGCCTGTATGG > NC_002947/2446293‑2446570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |