New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3540125	30 (1.300)	4 (0.180)	4/240	NT	11.8%	coding (769/1539 nt)	PP_3127	exopolysaccharide transport protein
	?	NC_002947	= 3540140	31 (1.400)					coding (784/1539 nt)	PP_3127	exopolysaccharide transport protein

CAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGCAAGATCCAGGCGCTCGAAGCCAGTG  >  NC_002947/3539984‑3540272                                                                                                                                              |                                                                                                                                                    cAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGc                                                                                                                                             >  2:533168/1‑150 (MQ=255)       cTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCgg                                                                                                                                       >  1:47557/1‑150 (MQ=255)                   aTGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGcc                                                                                                                           >  2:252341/1‑150 (MQ=255)                       tGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGAcc                                                                                                                       >  1:161723/1‑150 (MQ=255)                         tCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTg                                                                                                                     <  1:122659/150‑1 (MQ=255)                            cgggcggAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGccc                                                                                                                  >  2:175043/1‑150 (MQ=255)                               gcggAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGaa                                                                                                               <  2:310407/150‑1 (MQ=255)                                         aaTTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCaa                                                                                                     <  1:446191/150‑1 (MQ=255)                                              cGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTg                                                                                                <  1:175043/150‑1 (MQ=255)                                                    gTCGACCGTGACTATAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCATGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGcc                                                                                          <  2:277409/150‑1 (MQ=255)                                                       gACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGaa                                                                                       <  2:602470/150‑1 (MQ=255)                                                        aCCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCAACCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAAt                                                                                      >  1:589182/1‑150 (MQ=255)                                                            tGACTACAAGGCTGCCCAGGAAGAGCTTCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATAcgc                                                                                  >  1:391146/1‑150 (MQ=255)                                                                tACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCaa                                                                              <  2:431358/150‑1 (MQ=255)                                                                tACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCaa                                                                              >  2:232396/1‑150 (MQ=255)                                                                  cAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAAct                                                                            <  1:252341/150‑1 (MQ=255)                                                                   aaGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGgccgggtgccctcggcaaccttg                                                                                                                              >  2:230116‑M1/1‑76 (MQ=255)                                                                   aaGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGgccgggtgccctcggcaaccttg                                                                                                                              <  1:230116‑M1/99‑24 (MQ=255)                                                                         ttccagGTAGCGCAGCTCTTCCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCcaa                                                                                                                                   >  1:230561‑M2/3‑85 (MQ=255)                                                                            cAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGc                                                                  >  2:88228/1‑150 (MQ=255)                                                                                  gagCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAg                                                            <  1:406638/150‑1 (MQ=255)                                                                                     cTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGgccgggtgccctcggcaaccttggt                                                                                                                            <  2:317465‑M1/83‑26 (MQ=255)                                                                                     cTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGgccgggtgccctcggcaaccttggt                                                                                                                            >  1:317465‑M1/1‑58 (MQ=255)                                                                                               tGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCt                                                                                                          <  1:120354/91‑1 (MQ=255)                                                                                               tGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCt                                                                                                          >  2:120354/1‑91 (MQ=255)                                                                                                  aaCTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATg                                            >  2:568676/1‑150 (MQ=255)                                                                                                   aCTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAActgct                                                                         <  1:314743/120‑1 (MQ=255)                                                                                                   aCTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAActgct                                                                         >  2:314743/1‑120 (MQ=255)                                                                                                          cTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCg                                    >  1:433718/1‑150 (MQ=255)                                                                                                          cTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCg                                    <  2:161723/150‑1 (MQ=255)                                                                                                                     cAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGCaa                         >  2:121664/1‑150 (MQ=255)                                                                                                                      aaTGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTg                                       >  2:293117/1‑135 (MQ=255)                                                                                                                      aaTGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTg                                       <  1:293117/135‑1 (MQ=255)                                                                                                                           cGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGCAAGATCCa                   >  2:204428/1‑150 (MQ=255)                                                                                                                                     accaAGGTTGCCGAGGGCACCCGGCcaaccttggtggcaaggccggcattggccgcagacagctccagttccaggtagcgcag                                                                            >  1:317465‑M2/1‑25 (MQ=255)                                                                                                                                     accaAGGTTGCCGAGGGCACCCGGCcaaccttggtggcaaggccggcattggccgcagacagctccagttccaggtagcgcag                                                                            <  2:317465‑M2/83‑59 (MQ=255)                                                                                                                                     accaAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGCAAGATCCAGGCGCTCGaa         >  1:455867/1‑150 (MQ=255)                                                                                                                                       caAGGTTGCCGAGGGCACCCGGCcaaccttggtggcaaggccggcattggccgcagacagctccagttccaggtagcgcagctcttcctgggcagcctt                                                          >  2:230116‑M2/1‑23 (MQ=255)                                                                                                                                       caAGGTTGCCGAGGGCACCCGGCcaaccttggtggcaaggccggcattggccgcagacagctccagttccaggtagcgcagctcttcctgggcagcctt                                                          <  1:230116‑M2/99‑77 (MQ=255)                                                                                                                                            ttGgccgggtgccctcggcaaccttggtggcaaggccggcattggccgcagacagctccagttccaggaagagctgcgctacctggaa                                                                >  1:230561‑M1/1‑3 (MQ=255)                                                                                                                                            ttGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGCAAGATCCAGGCGCTCGAAGCCAGTg  >  2:253791/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                    CAGACCCTGCGCATGAACATGCTGTCGCGGGCGGAGCTGGAATTCCGTGAGGTCGACCGTGACTACAAGGCTGCCCAGGAAGAGCTGCGCTACCTGGAACTGGAGCTGTCTGCGGCCAATGCCGGCCTTGCCACCAAGGTTGCCGAGGGCACCCGGCCAACCCGTGCCGACCTGCCCGAAGACCTGCCAAGCCTGAAAGCCGAATACGCGCAACTGCTGACCCGCTACAAGGACGCCCACCCGGATGTCGTGGCGGTCAAGCGCAAGATCCAGGCGCTCGAAGCCAGTG  >  NC_002947/3539984‑3540272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.