| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3584572 = | 21 (0.910) | 3 (0.140) | 3/240 | NT | 14.6% | coding (687/1011 nt) | benC | benzoate 1,2‑dioxygenase electron transfer component |
| ? | NC_002947 | 3584616 = | 15 (0.680) | coding (731/1011 nt) | benC | benzoate 1,2‑dioxygenase electron transfer component | |||||
CTGACCAACCTTGCCAAAGCTGGCGACAGCCTGAGCCTGGCCGGGCCGTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGC > NC_002947/3584429‑3584716 | cTGACCAACCTTGCCAAAGCTGGCGACAGCCTGAGCCTGGCCGGGCAGTTGGGCAGCTTCTACCTGCGGCCGATACAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACAGCGATGCTGGAGAAGATCGCCGAg > 2:56120/1‑150 (MQ=255) tGACCAACCTTGCCAAAGCTGGCGACAGCCTGAGCCTGGCCGGGCCGTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGc > 2:40201/1‑150 (MQ=255) cAAAGCTGGCGACAGCCTGAGCCTGGCCGGGCCGTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCa > 2:318264/1‑150 (MQ=255) aaaGCTGGCGACAGCCTGAGCCTGGCCGGGCCGTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCAc < 2:282577/150‑1 (MQ=255) ggccgggccgTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGt < 1:215448/150‑1 (MQ=255) actggctgtccgggttggcgacgcaggcgctgtaggtgaagttggggatacgtgccgccagcgcttgcaggcggtcgagttcgaccagatcaaagtcggtggtcaCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGt > 1:385508‑M1/106‑150 (MQ=255) gccgggccgTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGc > 1:61536/1‑133 (MQ=255) gccgggccgTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTCGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGc < 2:61536/133‑1 (MQ=255) cAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGa > 2:556912/1‑150 (MQ=255) cAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGa > 2:249738/1‑150 (MQ=255) ttCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGa < 1:112273/133‑1 (MQ=255) ttCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGa > 2:112273/1‑133 (MQ=255) gacGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGt < 1:45106/139‑1 (MQ=255) gacGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGt > 2:45106/3‑141 (MQ=255) aGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTc < 2:73475/134‑1 (MQ=255) aGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTc > 1:73475/1‑134 (MQ=255) cgcCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCaa < 1:318264/150‑1 (MQ=255) ttggggatacgtgccgccagcgcttgcaggcggtcgagttcgaccagatcaaagtcgttggtcaCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTAc > 2:540939‑M1/65‑104 (MQ=255) ttggggatacgtgccgccagcgcttgcaggcggtcgagttcgaccagatcaaagtcgttggtcaCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTAc < 1:540939‑M1/40‑1 (MQ=255) tgctgGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACg < 2:285446/93‑1 (MQ=255) tgctgGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACg > 1:285446/1‑93 (MQ=255) tACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACtt > 2:408229/1‑150 (MQ=255) cGGGCTGGCCCCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCAc > 2:63328/1‑150 (MQ=255) ccGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGcc < 1:217260/150‑1 (MQ=255) aagcTCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCGGATCTACGGAGTGACCGACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGAACGTATCCCCAACTTCTCATACAGCGCATGCGTCGCCAACCCGGACAGc < 2:279774/150‑1 (MQ=255) | CTGACCAACCTTGCCAAAGCTGGCGACAGCCTGAGCCTGGCCGGGCCGTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGC > NC_002947/3584429‑3584716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |