New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3584572 = | 21 (0.910) | 3 (0.140) | 3/240 | NT | 14.6% | coding (687/1011 nt) | benC | benzoate 1,2‑dioxygenase electron transfer component |
? | NC_002947 | 3584616 = | 15 (0.680) | coding (731/1011 nt) | benC | benzoate 1,2‑dioxygenase electron transfer component |
GGCCGGGCCGTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGTACCCGCAGAAGG > NC_002947/3584467‑3584732 | ggccgggccgTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGt < 1:215448/150‑1 (MQ=255) actggctgtccgggttggcgacgcaggcgctgtaggtgaagttggggatacgtgccgccagcgcttgcaggcggtcgagttcgaccagatcaaagtcggtggtcaCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGt > 1:385508‑M1/106‑150 (MQ=255) cAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGa > 2:556912/1‑150 (MQ=255) cAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGa > 2:249738/1‑150 (MQ=255) ttCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGa < 1:112273/133‑1 (MQ=255) ttCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGa > 2:112273/1‑133 (MQ=255) gacGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGt > 2:45106/3‑141 (MQ=255) gacGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGt < 1:45106/139‑1 (MQ=255) aGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTc < 2:73475/134‑1 (MQ=255) aGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTc > 1:73475/1‑134 (MQ=255) cgcCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCaa < 1:318264/150‑1 (MQ=255) tACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACtt > 2:408229/1‑150 (MQ=255) cGGGCTGGCCCCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCAc > 2:63328/1‑150 (MQ=255) ccGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGcc < 1:217260/150‑1 (MQ=255) aagcTCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCGGATCTACGGAGTGACCGACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGAACGTATCCCCAACTTCTCATACAGCGCATGCGTCGCCAACCCGGACAGc < 2:279774/150‑1 (MQ=255) acgccgtagatcaggtgcagcgggtgctcgctgccctgctcggcgTGACCACCGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGt > 1:385508‑M2/46‑150 (MQ=255) gtagatcaggtgcagcgggtgctcgctgccctgctcggcgTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCaa < 1:540939‑M2/64‑1 (MQ=255) gtagatcaggtgcagcgggtgctcgctgccctgctcggcgTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCaa > 2:540939‑M2/41‑104 (MQ=255) gCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGTACCCGCAGAAgg < 1:556912/150‑1 (MQ=255) gCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGTACCCGCAGAAgg < 1:249738/150‑1 (MQ=255) cccGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCAACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCa < 2:26121/126‑1 (MQ=255) cccGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCAACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCa > 1:26121/1‑126 (MQ=255) | GGCCGGGCCGTTGGGCAGCTTCTACCTGCGGCCGATCCAGCGCCCGCTGTTGCTGCTGGCCGGTGGTACCGGGCTGGCACCGTTCACCGCGATGCTGGAGAAGATCGCCGAGCAGGGCAGCGAGCACCCGCTGCACCTGATCTACGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGTACCCGCAGAAGG > NC_002947/3584467‑3584732 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |