| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5162643 | 19 (0.820) | 5 (0.270) | 5/198 | NT | 24.4% | intergenic (+118/+83) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| ? | NC_002947 | = 5162675 | 16 (0.870) | intergenic (+150/+51) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase | |||||
CCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCC > NC_002947/5162495‑5162789 | ccTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGt > 2:455329/1‑150 (MQ=255) cTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCACATCCTGCGTTTCCCGCTTCTTTCTGTCTGCGTGTAAGGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTa > 1:292298/1‑150 (MQ=255) gCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATc < 2:309777/150‑1 (MQ=255) cTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGAcc > 1:294168/1‑150 (MQ=255) aGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTgag < 2:564465/150‑1 (MQ=255) aaGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACt > 1:263801/1‑150 (MQ=255) gTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACtgt < 1:186381/150‑1 (MQ=255) gCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgata > 2:90786‑M1/1‑118 (MQ=255) gCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc > 1:549626/1‑150 (MQ=255) gCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCCGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTAc < 2:425988/150‑1 (MQ=255) cacCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgt > 1:455329‑M2/1‑146 (MQ=255) cccctGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtg < 1:337791‑M1/149‑38 (MQ=255) tgctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGGCCGCTCCCCCAGTATCACCCCAGACCTTTGGAACTGTTCGGTAActgtgggag < 2:612804‑M2/150‑10 (MQ=255) ctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagcg < 1:90786‑M1/150‑44 (MQ=255) ctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcg > 2:549626‑M2/1‑139 (MQ=255) tctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgg > 2:148448‑M2/1‑138 (MQ=255) aCCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCt > 2:96170/1‑113 (MQ=255) aCCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCt < 1:96170/113‑1 (MQ=255) cTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgc > 2:263801‑M2/1‑128 (MQ=255) gAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCCAAGTATCACCACCGAACCTGAGACCTGTCCTGTACttttgggagcgggcaagcccgcga > 2:595818‑M2/1‑126 (MQ=255) ccGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCACCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCtgat > 1:580064/1‑150 (MQ=255) cGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaa < 2:173177‑M2/118‑17 (MQ=255) cGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCACACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaa > 1:173177‑M2/1‑102 (MQ=255) tttCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCa < 2:292298/150‑1 (MQ=255) cGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTCGCCGGTTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTAGGAGCGGGGAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCt > 1:296450/1‑150 (MQ=255) tttGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtggga > 1:137653‑M1/1‑52 (MQ=255) tttGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtggga < 2:137653‑M1/92‑41 (MQ=255) cTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATcac > 2:370775/1‑150 (MQ=255) tgtgtgAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGCAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATcaca < 2:294168/150‑1 (MQ=255) gtgtgAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGCACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGACGTAACCAGCGCCTGATGAATCAGCACTTGCGCAGAATCacac > 2:128406/1‑150 (MQ=38) ccTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGCAACAGGCGCCTGATGAATCAGCGCTTGCGCCGAATCCAGCTATCAATCGAATAccccc > 2:497410/1‑149 (MQ=38) cTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTTGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGc > 2:260198/1‑150 (MQ=255) tCGCGGGCTTGCCCGCTCCCAAAAgtacaggacaggtctcaggttcggtggtgatacttggggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttc > 2:595818‑M1/1‑24 (MQ=255) gcgGGCTTGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttcag > 2:263801‑M1/1‑22 (MQ=255) gCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACg > 2:42566/1‑150 (MQ=255) cTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGa < 2:580064/150‑1 (MQ=255) ttGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgtgagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccg > 1:173177‑M1/1‑16 (MQ=255) ttGCCCGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccg < 2:173177‑M1/118‑103 (MQ=255) ccGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttcaggtgaagcaga > 2:148448‑M1/1‑12 (MQ=255) cGCTCCCACAGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttcaggtgaagcagag > 2:549626‑M1/1‑11 (MQ=255) cGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaagaggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttcaggtgaagcagag < 1:90786‑M2/150‑108 (MQ=255) cGCTCCCACAGTATAACCACAGACCTGGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCaa < 1:128406/150‑1 (MQ=255) cTCCCACAGttaccgaacagttccaaaggtctggggtgatactgggggagcggccaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttcaggtgaagcagagca < 2:612804‑M1/150‑142 (MQ=255) tCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaa < 2:137653‑M2/92‑53 (MQ=255) tCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaa > 1:137653‑M2/1‑40 (MQ=255) cacaGTATCACCACAGACCTTGAGAACTGTGCTGTACctgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttcaggtgaagcagagcagggg < 1:337791‑M2/150‑114 (MQ=255) acaGgtacagcacagttctcaaggtctgtggtgatactgtgggagcgggcaagcccgcgaaggggccggcgcatttcacacagacaaaaagaagcgggaaacgccggatggggtcggcgtttcccgcttcaggtgaagcagagcagggtg > 1:455329‑M1/1‑4 (MQ=255) acaGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGaa > 2:425797/1‑103 (MQ=255) acaGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGaa < 1:425797/103‑1 (MQ=255) | CCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCC > NC_002947/5162495‑5162789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |