New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1053240 =	29 (1.250)	5 (0.230)	3/240	NT	15.9%	coding (130/1428 nt)	PP_0910	hypothetical protein
	?	NC_002947	1053338 =	25 (1.130)					coding (32/1428 nt)	PP_0910	hypothetical protein

AACAACGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGT  >  NC_002947/1053092‑1053385                                                                                                                                                     |                                                                                                                                                      aacaacGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTcgctgcgc                                                                                                                                                      <  1:90477/150‑1 (MQ=255)    aacGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCgctgcgctgc                                                                                                                                                   >  2:131973/1‑150 (MQ=255)       gggCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑Cg                                                                                                                                              >  2:187542/1‑150 (MQ=255)           ccAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCg                                                                                                                                        >  1:589588/1‑150 (MQ=255)            cAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGc                                                                                                                                       >  2:341706/1‑150 (MQ=255)                 cATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGATAGCAGCTCGGCA‑‑CGG‑‑TCGCCTGGc                                                                                                                                  >  1:340182/1‑150 (MQ=255)                                   ttGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGc                                                                                                                <  1:187542/150‑1 (MQ=255)                                           gcAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCg                                                                                                        >  1:45656/1‑150 (MQ=255)                                                        ttcaatgatcctgggcctgctaagctgcacgccggtttttcgctcacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCTGGCCT‑‑TGGCCTGGCCACCCGACAACGCTTCGCCGGGc                                                                                                           <  2:531376‑M1/43‑1 (MQ=255)                                                        ttcaatgatcctgggcctgctaagctgcacgccggtttttcgctcacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCT‑‑GGCCTTGGCCTGGCCACCCGACAACGCTTCGCCGGGc                                                                                                           >  1:531376‑M1/94‑136 (MQ=255)                                                             cGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCggg                                                                                      <  2:589588/150‑1 (MQ=255)                                                               aaaGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTgg                                                                                                  <  1:106023/136‑1 (MQ=255)                                                               aaaGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTgg                                                                                                  >  2:106023/1‑136 (MQ=255)                                                                       tGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTcac                                                                            >  1:591471/1‑150 (MQ=255)                                                                          tACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAgg                                                                         <  2:564117/150‑1 (MQ=255)                                                                             ccACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGcgtcgt                                                                               <  1:233829/141‑1 (MQ=255)                                                                             ccACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGcgtcgt                                                                               >  2:233829/1‑141 (MQ=255)                                                                               gctgcacgccggtttttcgctcacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCA‑‑CGG‑‑TAGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc                                                                    <  1:10910‑M1/80‑1 (MQ=255)                                                                               aCGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc                                                                    <  1:48713/150‑1 (MQ=255)                                                                               aCGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc                                                                    >  2:177946/1‑150 (MQ=255)                                                                               aCGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc                                                                    >  2:121923/1‑150 (MQ=255)                                                                                  gCGAAGTCCAGGCGTAGCTCTGGCGAGGGGTTGGCCGAGGGCAGGGAATATGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggccaag                                                                 <  2:109840/150‑1 (MQ=255)                                                                                  gCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggccaag                                                                 <  2:45656/150‑1 (MQ=255)                                                                                                    cacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCaga                                               >  1:40172‑M1/50‑150 (MQ=255)                                                                                                       ggCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg                                            <  2:340182/150‑1 (MQ=255)                                                                                                       gcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg                                            >  2:10910‑M1/47‑150 (MQ=255)                                                                                                               gTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCg                                    >  2:474101/1‑150 (MQ=255)                                                                                                                ttGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCgg                                   <  1:131973/150‑1 (MQ=255)                                                                                                                         ggCAGTGAATATGCTTTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TAGCCAGGCTGGCTGTGGCCGCACGGGCGCATTCTTCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc                          <  1:228380/150‑1 (MQ=255)                                                                                                                                    ggCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga               <  2:591471/150‑1 (MQ=255)                                                                                                                                    ggCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga               <  1:287948/150‑1 (MQ=255)                                                                                                                                     gCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCgag              >  2:231574/1‑150 (MQ=255)                                                                                                                                       aTTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa                        <  2:103012/138‑1 (MQ=255)                                                                                                                                       aTTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa                        >  1:103012/1‑138 (MQ=255)                                                                                                                                             gTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTgg      <  1:121923/150‑1 (MQ=255)                                                                                                                                              tCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTggg     <  1:341706/150‑1 (MQ=255)                                                                                                                                                 ctgcgctgcA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGt  <  2:167496/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      AACAACGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGT  >  NC_002947/1053092‑1053385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.