New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1053240 =	29 (1.250)	5 (0.230)	3/240	NT	15.9%	coding (130/1428 nt)	PP_0910	hypothetical protein
	?	NC_002947	1053338 =	25 (1.130)					coding (32/1428 nt)	PP_0910	hypothetical protein

TCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGTTGC  >  NC_002947/1053191‑1053478                                                                                                                                                    |                                                                                                                                             cacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCaga                                                                                                                                            >  1:40172‑M1/50‑150 (MQ=255)    ggCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg                                                                                                                                         <  2:340182/150‑1 (MQ=255)    gcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg                                                                                                                                         >  2:10910‑M1/47‑150 (MQ=255)            gTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCg                                                                                                                                 >  2:474101/1‑150 (MQ=255)             ttGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCgg                                                                                                                                <  1:131973/150‑1 (MQ=255)                      ggCAGTGAATATGCTTTGCGGTCGCTGCGCTGCACGGTAGCCAGGCTGGCTGTGGCCGCACGGGCGCATTCTTCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc                                                                                                                       <  1:228380/150‑1 (MQ=255)                                 ggCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga                                                                                                            <  2:591471/150‑1 (MQ=255)                                 ggCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga                                                                                                            <  1:287948/150‑1 (MQ=255)                                  gCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCgag                                                                                                           >  2:231574/1‑150 (MQ=255)                                    aTTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa                                                                                                                     >  1:103012/1‑138 (MQ=255)                                    aTTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa                                                                                                                     <  2:103012/138‑1 (MQ=255)                                          gTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTgg                                                                                                   <  1:121923/150‑1 (MQ=255)                                           tCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTggg                                                                                                  <  1:341706/150‑1 (MQ=255)                                            ccctctgctgctggccttggccttggccgcctgtgacgacgccccgcgcttcacccacgccgagcccggcgaagcgttgtcgggtggccaggcgaccgtgcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGc                                                                                                 >  2:10910‑M2/105‑150 (MQ=255)                                              ctgcgctgcACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGt                                                                                               <  2:167496/150‑1 (MQ=255)                                               tctgctgctggccttggccttggccgcctgtgacgacgccccgcgcttcacccacgccgagcccggcgaagcgttgtcgggtggccaggcgaccgtgcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTg                                                                                              >  1:40172‑M2/102‑150 (MQ=255)                                                                    ggccgcctgtgacgacgccccgcgcttcacccacgccgagcccggcgaagcgttgtcgggtggccaggctaccgtgcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGc                                                                         <  1:10910‑M2/70‑1 (MQ=255)                                                                               gCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGTCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGccc                                                              >  2:536826/1‑150 (MQ=255)                                                                               gCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGGCAGCGACAAGGACATCGAGAAACCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGccc                                                              >  2:43442/1‑150 (MQ=255)                                                                                       gggCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCa                                                                   >  2:19044/1‑137 (MQ=255)                                                                                       gggCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCa                                                                   <  1:19044/137‑1 (MQ=255)                                                                                        ggCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGACCAGGATCAtt                                                     >  2:425904/1‑150 (MQ=255)                                                                                                    gTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc                                                                                                                       >  1:83233/1‑72 (MQ=255)                                                                                                    gTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc                                                                                                                       <  2:83233/72‑1 (MQ=255)                                                                                                       aaGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAAttt                                      >  2:15224/1‑150 (MQ=255)                                                                                                         gcgcGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGTCCAGGATCATTGAATAAGAGCAATTTGc                                    >  1:453219/1‑150 (MQ=255)                                                                                                         gcccggcgaagcgttgtcgggtggccaggccaaggccagcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGaa                                                  >  1:531376‑M2/44‑136 (MQ=255)                                                                                                         gcccggcgaagcgttgtcgggtggccaggccaaggccagcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGaa                                                  <  2:531376‑M2/93‑1 (MQ=255)                                                                                                                   tcgtcACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAACAACGGGCTTGCAGCTGAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTtga                          <  1:231574/150‑1 (MQ=255)                                                                                                                                      ccaaggccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGcgcg       >  2:514941/1‑150 (MQ=255)                                                                                                                                        aaggccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGt     <  1:514941/150‑1 (MQ=255)                                                                                                                                        aaggccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGt     >  2:505684/1‑150 (MQ=255)                                                                                                                                           gccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGTTGc  <  2:453219/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                             TCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGTTGC  >  NC_002947/1053191‑1053478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.