New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2872929	19 (0.820)	3 (0.140)	3/236	NT	13.1%	coding (189/1164 nt)	PP_2525	hypothetical protein
	?	NC_002947	= 2872955	22 (1.010)					coding (163/1164 nt)	PP_2525	hypothetical protein

TCTTCGGTGGCAAAGCCCAGGCGCAGGCGCCTGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAGCGGTAGTTGCCGATGGCAA  >  NC_002947/2872813‑2873104                                                                                                                                               |                                                                                                                                                      tCTTCGGTGGCAAAGCCCAGGCGCAGGCGCCGGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCCGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCttcgacc                                                                                                                                                <  2:346517‑M2/150‑8 (MQ=255)             aaGCCCAGGCGCAGGCGCCTGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCtgt                                                                                                                                    <  2:597918/150‑1 (MQ=255)             aaGCCCAGGCGCAGGCGCCTGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCtgt                                                                                                                                    >  1:597918/1‑150 (MQ=255)                gtcaggcgcctgcgCCTGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCg                                                                                                                                 <  1:101996/148‑1 (MQ=255)                           gcgcCTGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCcag                                                                                                                      >  1:94798/1‑150 (MQ=255)                              ccTGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCcagcag                                                                                                                   >  2:348492/1‑150 (MQ=255)                                 gACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGgcg                                                                                                                >  2:430653/1‑150 (MQ=255)                                         tCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCt                                                                                                        >  2:510743/1‑150 (MQ=255)                                                   gCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGtt                                                                                              <  1:207527/150‑1 (MQ=255)                                                   gCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCCGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGtt                                                                                              <  1:346517/150‑1 (MQ=255)                                                     cTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGgc                                                                                                                 <  1:386662/129‑1 (MQ=255)                                                     cTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGgc                                                                                                                 >  2:386662/1‑129 (MQ=255)                                                              gCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGc                                                                                   >  2:30677/1‑150 (MQ=255)                                                                 cTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGc                                                                                >  1:51578/1‑150 (MQ=255)                                                                                              tCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTgg                                                   <  1:249541/150‑1 (MQ=255)                                                                                                       gCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCttcgacctggtgggctggcccagaaaccagcgcacgaatgcggcgcggcgaagtgcccatccaaggccagcatccgagcgaagtcaggcgcctgcgcctgggctttgcc                                          <  1:488623‑M2/150‑110 (MQ=255)                                                                                                           accaGGTCGAATCGAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGGCGTTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGgcagca                                      >  2:479071/1‑150 (MQ=255)                                                                                                               ggTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGGTTTGCCGCTGCCGTTGGCACCGGTCGCAAGTGTTAGTTGGCTCAGCGGCAGCACCAg                                  >  1:157037/1‑150 (MQ=255)                                                                                                                 tCGAATCCAGCCCGCCTTCACGGGCGAGGGCttcgacctggtgggctggcccagaaaccagcgcacgaatgcggcgcggcgaagtgcccatccaaggcca                                                                                  <  1:264059‑M2/100‑70 (MQ=255)                                                                                                                 tCGAATCCAGCCCGCCTTCACGGGCGAGGGCttcgacctggtgggctggcccagaaaccagcgcacgaatgcggcgcggcgaagtgcccatccaaggcca                                                                                  >  2:264059‑M2/1‑31 (MQ=255)                                                                                                                   gAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAggtgg                              <  2:71920/150‑1 (MQ=255)                                                                                                                         aGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCCGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATc                        <  1:499355/150‑1 (MQ=255)                                                                                                                            ccGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAg                     >  1:514857/1‑150 (MQ=255)                                                                                                                             cGCCTTCACTGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAGc                    <  2:83261/150‑1 (MQ=255)                                                                                                                              gCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGc                                                  >  1:608170/1‑119 (MQ=255)                                                                                                                              gCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGc                                                  <  2:608170/119‑1 (MQ=255)                                                                                                                                           aGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAGCGGTAGTTGCCGATg      <  2:51578/150‑1 (MQ=255)                                                                                                                                            gggCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGTCAGCTCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAGCGGTAGTTGCCGATgg     <  1:6233/150‑1 (MQ=255)                                                                                                                                            gggCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAggt                                >  2:105090/1‑123 (MQ=255)                                                                                                                                            gggCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAggt                                <  1:105090/123‑1 (MQ=255)                                                                                                                                              gCttcgacctggtgggctggcccagaaaccagcgcacgaatgcggcgcggcgaagtgcccatccaaggccagcatccgagcgaagtcaggcgcctgcgcctgggctttgccaacgaagacctcggttttgccatcaccctcggcctgcca   >  2:488623‑M2/1‑2 (MQ=255)                                                                                                                                              gCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAGCGGTAGTTGCCGATGGCa   >  1:26221/1‑150 (MQ=255)                                                                                                                                               cTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAGCGGTAGTTGCCGATGGCaa  <  1:578753/150‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                      TCTTCGGTGGCAAAGCCCAGGCGCAGGCGCCTGACTTCGCTCGGATGCTGGCCTTGGATGGGCACTTCGCCGCGCCGCATTCGTGCGCTGGTTTCTGGGCCAGCCCACCAGGTCGAATCCAGCCCGCCTTCACGGGCGAGGGCTTCGACCACACCGCCCTGTGCGGTTTCGGCCAGCAGGCGCAGCGCCTTGTACAGGTTGGATTTGCCGCTGCCGTTGGCACCGGTCACCAGGTTGAGTTGGCTCAGCGGCAGCACCAGGTGGTTGATCGAGCGGTAGTTGCCGATGGCAA  >  NC_002947/2872813‑2873104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.