New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3464300 =	23 (1.000)	6 (0.320)	5/202	NT	24.2%	coding (101/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
	?	NC_002947	3464387 =	19 (1.020)					coding (14/1929 nt)	PP_3078	ABC transporter substrate‑binding protein

GTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGTGTCGAATTCCTTGACCATCTGGCCTG  >  NC_002947/3464243‑3464535                                                                                                                                                 |                                                                                                                                                     ctgctggaagtgaccagccgccaggactgattcacccctcccggtgatcagccccccTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAgggggg                                                                                                                                                 >  1:159648‑M1/58‑150 (MQ=255)   gggAGCGGCCTGGACCGTAAAGCCTATGCACAAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCt                                                                                                                                               <  1:283064/150‑1 (MQ=255)    ggAGGGGCCGGGGCCGTAAAGCCTATGCACGAAAATACAAGCCACCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTg                                                                                                                                              >  2:583360/1‑150 (MQ=255)          gCCGGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCAcc                                                                                                                                        <  2:369384/150‑1 (MQ=255)                           caTGCACGAAAATCAAAGACCCCAGCATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAAGGAGGTTGTCTGGTCTGGCCTTTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGt                                                                                                                       <  2:22759/149‑1 (MQ=38)                                aCGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCgg                                                                                                                                      >  2:585258/1‑130 (MQ=255)                                aCGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCgg                                                                                                                                      <  1:585258/130‑1 (MQ=255)                                        aCAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTATGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGt                                                                                                          <  1:197302/150‑1 (MQ=255)                                              ccccACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCg                                                                                                                                       <  2:439699/115‑1 (MQ=255)                                              ccccACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCg                                                                                                                                       >  1:439699/1‑115 (MQ=255)                                                    cccccctgtgggagcgggtttacccgcgaagaggccagaccagacaacctcgttgcctgctccgacgcattcgcgggtaaacccgctcccacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCcagcag                                                                                              >  1:159648‑M2/94‑150 (MQ=255)                                                     aTACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAgg                                                                                             <  2:240019/150‑1 (MQ=255)                                                      tACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGTTCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAggt                                                                                            <  1:506567/150‑1 (MQ=255)                                                              GGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCg                                                                                    <  1:30336‑M1/150‑1 (MQ=255)                                                                 GCGGGTTTCCCCGAGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACTGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAAc                                                                                 >  2:161698‑M1/1‑150 (MQ=255)                                                                     gtttacccgcgaagaggccagaccagacaacctcgttgcctgctccgacgcattcgcgggtaaacccgctcccacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTggg                                                                             >  1:396325‑M2/77‑150 (MQ=255)                                                                           ccgcgaagaggccagaccagacaacctcgttgcctgctccgacgcattcgcgggtaaacccgctcccacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCa                                                                       >  1:181899‑M2/71‑150 (MQ=255)                                                                           CCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCa                                                                       <  2:410440‑M1/150‑1 (MQ=255)                                                                            CGCGAATGCGTCGGAGCAGGCAAGGAGGTTGTCTGGTCTGGGCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCAc                                                                      >  2:410148‑M1/1‑150 (MQ=255)                                                                               GAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCgg                                                                   >  1:410440‑M1/1‑150 (MQ=255)                                                                                 ATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTATGCCTATATACCCGCTCCCACAGGGGGGCCGATCTCTGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGc                                                                 >  1:599076‑M1/1‑150 (MQ=255)                                                                                     gTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGaa                                                                                                                            <  2:496845/87‑1 (MQ=255)                                                                                     gTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGaa                                                                                                                            >  1:496845/1‑87 (MQ=255)                                                                                     gTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTg                                                             >  2:566876/1‑150 (MQ=255)                                                                                           ccagacaacctcgttgcctgctccgacgcattcgcgggtaaacccgctcccacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGgt                                                       <  2:396325‑M2/96‑1 (MQ=255)                                                                                             aGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAAc                                                                                 >  1:281277/1‑122 (MQ=255)                                                                                             aGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAAc                                                                                 <  2:281277/122‑1 (MQ=255)                                                                                              ggCAACGAGGTTGTCTGGTCTGGCCTCTCCGCTGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGtt                                                    <  1:528967/150‑1 (MQ=255)                                                                                              gacaacctcgttgcctgctccgacgcattcgcgggtaaacccgctcccacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACCGGGTCTTCACCGGGCCTTGCACGGTGtt                                                    <  2:159648‑M2/99‑1 (MQ=255)                                                                                              accaacctcgttgcctgctccgacgcattcgcgggtaaaccctctcccacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGtt                                                    <  2:181899‑M2/99‑1 (MQ=255)                                                                                                       gTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTgc                                           >  1:58217/1‑150 (MQ=255)                                                                                                             tggtctggCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACAGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGaa                                     >  2:580493/1‑150 (MQ=255)                                                                                                                    gCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCg                                               >  2:308109/1‑133 (MQ=255)                                                                                                                    gCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCg                                               <  1:308109/133‑1 (MQ=255)                                                                                                                       tctTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGgtg                           >  2:159167/1‑150 (MQ=255)                                                                                                                                          tcccacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGTGTCGAATTCCTTGACCATCt        >  2:47085‑M2/8‑150 (MQ=255)                                                                                                                                            ccacaGGGGGGCTCATCCCCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACCTCCAGCAGGTGGCAGCCGAACTGGGTCTTCCCCGGGCCTTGCACGGGGGTGCCCGGTACGCTTAAGAGCACGGTGTCGAATTCCTTGACGATCTgg      >  1:166368‑M2/6‑150 (MQ=255)                                                                                                                                             cacaGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGTGTCGAATTCCTTGACCATCTGGc     >  2:611315‑M2/5‑150 (MQ=255)                                                                                                                                               caGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGTGTCGAATTCCTTGACCATCTGGCCt   <  1:47085‑M2/148‑1 (MQ=255)                                                                                                                                                aGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGTGTCGAATTCCTTGACCATCTGGCCTg  <  1:611315‑M2/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     GTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCGGAGCAGGCAACGAGGTTGTCTGGTCTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGGGGCTGATCACCGGGAGGGGTGAATCAGTCCTGGCGGCTGGTCACTTCCAGCAGGTGGTAGCCGAACTGGGTCTTCACCGGGCCTTGCACGGTGTTGACCGGTGCGCTGAAGACCACGGTGTCGAATTCCTTGACCATCTGGCCTG  >  NC_002947/3464243‑3464535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.