New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4267344 = | 28 (1.210) | 5 (0.220) | 5/242 | NT | 18.1% | coding (558/1254 nt) | galP‑IV | porin‑like protein |
? | NC_002947 | 4267424 = | 18 (0.800) | coding (478/1254 nt) | galP‑IV | porin‑like protein |
TAGTTGAAGCCGTCCGAGGTGACCCCGGGCGCGGCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGTAGTCGTCGGCCGCTCGCCCGTCATC > NC_002947/4267279‑4267571 | tAGTTGAAGCCGTCCGAGGTGCCACCGGGTGCGGCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAg < 2:539432/150‑1 (MQ=255) tAGTTGAAGCCGTCCGAGGTGACCCCGGGCGCGGCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAg < 2:301611/150‑1 (MQ=255) ggagttgttgccggatattgggctgttgcgttacgacgatggccgcctgctgccgcagcccttccGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAg > 1:188880‑M1/66‑150 (MQ=255) gTTGAAGCCGTCCGAGGTGACCCCGGGCGCGGCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTGAGGACTTAGATGCCCCGCGAGGCGAGCAGGGCACCACGGAAGGt > 2:529679/1‑150 (MQ=255) cggatattccgctgttgcgttacgacgatggccgcctgctgccgcagaccttccGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGgcag > 2:454233‑M1/55‑150 (MQ=255) cccGGGCGCGGCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGAACGACGGAAGGTACAGGGCAGCAGGCGGCCAtc > 1:188842/1‑150 (MQ=255) gcgGCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTaa < 1:93027/150‑1 (MQ=255) ggCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGCAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACg > 2:230845/1‑150 (MQ=255) cccAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGATACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCa > 2:188417/1‑150 (MQ=255) aGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACa > 1:581292/1‑150 (MQ=255) aGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAata > 2:45364/1‑150 (MQ=255) gTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTTGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATc > 2:551449/1‑150 (MQ=255) ctgccgcagaccttccgtggtgccatgctcgactcgcgggaaatcgaaggcctgagcctgcaggccggccagtaccgcgaggtgagcctgcgccacGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCg > 2:454233‑M2/97‑150 (MQ=255) cGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTc < 1:529679/150‑1 (MQ=255) gAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTcc > 1:199973/1‑150 (MQ=255) cttccgtggtgccatgctcgactcgcgggaaatcgaaggcctgagcctgcaggccggccagtaccgcgaggtgagcctgcgccacGGAAGGGCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCCCAATATCCGGCAACAACTcc > 1:188880‑M2/86‑150 (MQ=255) catgctcgactcgcgggaaatcgaaggcctgagcctgcaggccggccagtaccgcgaggtgagcatggcaccacGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCAc < 2:281243‑M2/70‑1 (MQ=255) catgctcgactcgcgggaaatcgaaggcctgagcctgcaggccggccagtaccgcgaggtgagcatggcaccacGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCAc > 1:281243‑M2/75‑144 (MQ=255) gcgGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTACTTCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGa < 1:162684/150‑1 (MQ=255) cggccTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCg > 2:463746/1‑96 (MQ=255) cggccTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCg < 1:463746/96‑1 (MQ=255) gccTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTc < 2:113061/150‑1 (MQ=255) cctgagcctgcaggccggccagtaccgcgaggtgagcctgcgccacGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTcgcc < 1:454233‑M2/104‑1 (MQ=255) aGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGCACATACGCAGCTTCGCCGCCAgcccg > 1:78/1‑150 (MQ=255) ttCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAgcccggcccg > 1:612220/1‑150 (MQ=255) tttCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGt > 1:207584/1‑150 (MQ=255) cgcgAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATACGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGTAgtcg > 2:50256/1‑150 (MQ=255) ggCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGTAGTCGTCGGCCGCTCGccc < 1:50256/150‑1 (MQ=255) gCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGTAGTCGTCGGCCGCTCGCCCg > 2:514442/1‑150 (MQ=255) acGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGTAGTCGTCGGCCGCTCGCCCGTCATc < 2:40129‑M2/148‑1 (MQ=255) acGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGTAGTCGTCGGCCGCTCGCCCGTCATc < 1:514442‑M2/148‑1 (MQ=255) | TAGTTGAAGCCGTCCGAGGTGACCCCGGGCGCGGCCCAGGCAGATAGGTCCTGCATGTCCGAAGAGTGGCGCAGGCTCACCTCGCGGTACTGGCCGGCCTGCAGGCTCAGGCCTTCGATTTCCCGCGAGTCGAGCATGGCACCACGGAAGGTCTGCGGCAGCAGGCGGCCATCGTCGTAACGCAACAGCGGAATATCCGGCAACAACTCCCCCACCTTCAGCTCGGTCGCGGACATACGCAGCTTCGCCGCCAGCCCGGCCCGACCGTAGTCGTCGGCCGCTCGCCCGTCATC > NC_002947/4267279‑4267571 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |