New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4276970 =	28 (1.210)	6 (0.270)	6/244	NT	18.4%	coding (322/1236 nt)	glcF	glycolate oxidase iron‑sulfur subunit
	?	NC_002947	4277012 =	26 (1.150)					coding (364/1236 nt)	glcF	glycolate oxidase iron‑sulfur subunit

GGACCGCTGCCTGACCTGCCGCAACTGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGTGCGCCATGCACGCCGGAT  >  NC_002947/4276864‑4277157                                                                                                                                                     |                                                                                                                                                  tggtgacttgcgccggcaacttgcgtttgactgaggccggtagcagcgggcgcagcacctggccgctgcgggtcagggccttgaacagtgccgggcgcggcaccacCGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCggt                                                                                                                                                  >  1:209170‑M1/107‑150 (MQ=255)   aCCGCTGCCTGACCTGCCGCAACTGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTCCggtgg                                                                                                                                                >  2:503158/1‑150 (MQ=255)     cGCTGCCTGACCTGCCGCAACTGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGgtggtg                                                                                                                                              >  1:485892/1‑150 (MQ=255)      gCTGCCTGACCTGCCGCAACTGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGc                                                                                                                                             >  1:409775/1‑150 (MQ=255)         tgcgccggcaacttgcgtttgactgaggccggtagcagcgggcgcagcacctggccgctgcgggtcagggccttgaacagtgccgggcgcggcaccacCGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCcgc                                                                                                                                          >  1:24485‑M1/99‑150 (MQ=255)            tGACCTGCCGCAACTGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTGCGCCAGCGCCTGTTGCGCCTGGGCCTGCGGGCGGTGGTGCCGCGcc                                                                                                                                       >  1:223396/1‑150 (MQ=255)                          tttgactgaggccggtagcagcgggcgcagcacctggccgctgcgggtcagggccttgaacagtgccgggcgcggcaccacCGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGc                                                                                                                                             >  1:112552‑M1/82‑130 (MQ=255)                          tttgactgaggccggtagcagcgggcgcagcacctggccgctgcgggtcagggccttgaacagtgccgggcgcggcaccacCGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGc                                                                                                                                             <  2:112552‑M1/49‑1 (MQ=255)                                     cTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGAGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGTCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGAcctg                                                                                                              >  1:130825/1‑148 (MQ=255)                                           aTCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCgg                                                                                                        >  2:526900/1‑150 (MQ=255)                                                          ccACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGccc                                                                                         >  1:302552/1‑150 (MQ=255)                                                             cGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCgct                                                                                      >  2:537797/1‑150 (MQ=255)                                                                  tgctgGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCACCCGGTAATTTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTAc                                                                                 >  2:173649/1‑150 (MQ=255)                                                                     tgGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCgg                                                                              >  1:434714/1‑150 (MQ=255)                                                                      ggACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGc                                                                             >  1:540311/1‑150 (MQ=255)                                                                          aTCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCAGCTTCa                                                                         <  2:485892/150‑1 (MQ=255)                                                                           tCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGccc                                                                                                                     <  2:271130/105‑1 (MQ=255)                                                                           tCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGccc                                                                                                                     >  1:271130/1‑105 (MQ=255)                                                                            cGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGt                                                                       <  2:302552/150‑1 (MQ=255)                                                                                cgcgCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCaaa                                                                   <  1:537797/150‑1 (MQ=255)                                                                                 gcgcAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGTCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAAc                                                                  <  2:118572/150‑1 (MQ=255)                                                                                     aGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCaa                                                              <  1:411648/150‑1 (MQ=255)                                                                                     aGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCaa                                                              <  2:409775/150‑1 (MQ=255)                                                                                         gTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTg                                                          >  1:612124/1‑150 (MQ=255)                                                                                         gTCGAGCAGCAGGTGACACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTg                                                          >  2:458731/1‑150 (MQ=255)                                                                                            gAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCg                                                       >  1:28243/1‑150 (MQ=255)                                                                                                 gcggcaccaccgcacgcaggcccaggcgcaacaggcgctggccgagcgggcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCa                                                  >  1:24485‑M2/53‑150 (MQ=255)                                                                                                 gcagGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCa                                                  >  1:408603/1‑150 (MQ=255)                                                                                                    gcaccaccgcacgcaggcccaggcgcaacaggcgctggccgagcgggcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCaaa                                                                   >  1:112552‑M2/50‑130 (MQ=255)                                                                                                    gcaccaccgcacgcaggcccaggcgcaacaggcgctggccgagcgggcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCaaa                                                                   <  2:112552‑M2/81‑1 (MQ=255)                                                                                                         accgcacgcaggcccaggcgcaacaggcgctggccgagcgggcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTcacca                                          >  1:209170‑M2/45‑150 (MQ=255)                                                                                                            GCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCacac                                       <  1:98774‑M1/150‑1 (MQ=255)                                                                                                              ccGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCg                                     >  2:167950/1‑150 (MQ=255)                                                                                                               cGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCgg                                    <  2:434714/150‑1 (MQ=255)                                                                                                                gcaggcccaggcgcaacaggcgctggccgagcgggcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCggg                                   >  1:355117‑M2/38‑150 (MQ=255)                                                                                                                   ggcccaggcgcaacaggcgctggccgagcgggcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCa                                <  2:24485‑M2/116‑1 (MQ=255)                                                                                                                               gTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGt                    >  1:308008/1‑150 (MQ=255)                                                                                                                                            cTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGTGCGCCATGCACGc       >  1:142375/1‑150 (MQ=255)                                                                                                                                                 ggcgGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGTGCGCCATGCACGCCGGAt  <  2:209170‑M2/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGACCGCTGCCTGACCTGCCGCAACTGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCCACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCCGCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAGCGTCCGGCAGTGCGCCATGCACGCCGGAT  >  NC_002947/4276864‑4277157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.