New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4422784	26 (1.120)	4 (0.180)	4/240	NT	14.0%	coding (208/300 nt)	PP_5645	hypothetical protein
	?	NC_002947	= 4422807	24 (1.080)					coding (185/300 nt)	PP_5645	hypothetical protein

CTTTCCGCTCTAACCCCTCTCCCCTCTATTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCGGTAGTGAAGCGCTGG  >  NC_002947/4422667‑4422952                                                                                                                                             |                                                                                                                                                  ctTTCCGCTCTAACCCCTCTCCCCTCTATTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGActcct                                                                                                                                          <  2:290944/150‑1 (MQ=255)  tttCCGCTCTAACCCCTCTCCCCTCTATTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGActcctc                                                                                                                                         >  1:46825/1‑150 (MQ=255)           tAACCCCTCTCCCCTCTATTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATgcg                                                                                                                                >  2:249137/1‑150 (MQ=255)              cccctctcccctctATTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCAt                                                                                                                             >  2:466324/1‑150 (MQ=255)                     cccctctATTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGAt                                                                                                                      <  1:367594/150‑1 (MQ=255)                          ccaTTTCACCCCGCCTAATTGTACGGTCGCCCGGACAGCATCACTAGCAATTCGGCGAGCACTTCCCATGCCCCATCCCAAGGCCTTGGTCATCTATTCACTATCGCGGGAATCCAATGACTCCTCATCGATGCGCATGCCGGATGCCgt                                                                                                                 <  2:255406/148‑1 (MQ=255)                            aTTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGgtgt                                                                                                               <  1:249137/150‑1 (MQ=255)                             tttCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTa                                                                                                              <  1:565352/150‑1 (MQ=255)                             tttCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTa                                                                                                              >  1:501083/1‑150 (MQ=255)                                                tCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGc                                                                                           <  2:501083/150‑1 (MQ=255)                                                  ggTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGt                                                                                         <  2:207526/150‑1 (MQ=255)                                                  ggTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCACATGCCAAGGCCTTAGTAATCGATTCACTATGGCGGGAATCTAATGACTCCTCATGACTGCGCATGCCGGATGCGGTGGAAACACCAATGAACAGCTGCgc                                                                                         >  2:96686/1‑149 (MQ=255)                                                         gggACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGt                                                                                         >  1:291460/1‑143 (MQ=255)                                                         gggACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGt                                                                                         <  2:291460/143‑1 (MQ=255)                                                                cATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGcgcgcg                                                                           >  1:152231/1‑150 (MQ=255)                                                                      tAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAAcc                                                                     >  1:480083/1‑150 (MQ=255)                                                                                              tGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGc                                             <  2:46825/150‑1 (MQ=255)                                                                                                ccccATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAaca                                                                                                          >  2:319877/1‑87 (MQ=255)                                                                                                ccccATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAaca                                                                                                          <  1:319877/87‑1 (MQ=255)                                                                                                  ccATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAatgaccaaggccttggcatggggcataggccgtgctcgccgaat                                                                                                       <  2:567187‑M2/88‑45 (MQ=255)                                                                                                  ccATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAatgaccaaggccttggcatggggcataggccgtgctcgccgaat                                                                                                       >  1:567187‑M2/1‑44 (MQ=255)                                                                                                       ccAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAatgaccaaggccttggcatggggcataggccgtgctcgccgaatt                                                                                                      <  1:589071‑M2/84‑46 (MQ=255)                                                                                                       ccAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAatgaccaaggccttggcatggggcataggccgtgctcgccgaatt                                                                                                      >  2:589071‑M2/1‑39 (MQ=255)                                                                                                                   tCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGt                        >  1:578746/1‑150 (MQ=255)                                                                                                                   tCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGt                        >  2:528022/1‑150 (MQ=255)                                                                                                                           tCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCgg                <  2:480083/150‑1 (MQ=255)                                                                                                                                    cGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGa                                    <  1:512423/121‑1 (MQ=255)                                                                                                                                    cGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGa                                    >  2:512423/1‑121 (MQ=255)                                                                                                                                     gggAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCGGTAGTGAAgcg      >  1:409706/1‑150 (MQ=255)                                                                                                                                        aaTCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCGGTAGTGAAGCGCTg   <  1:466324/150‑1 (MQ=255)                                                                                                                                         aTCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCGGTAGTGAAGCGCTgg  <  2:578746/150‑1 (MQ=255)                                                                                                                                            gAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCGGTAGTGAAGCGCTgg  >  2:358029/1‑147 (MQ=255)                                                                                                                                            gAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCGGTAGTGAAGCGCTgg  <  1:358029/147‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                  CTTTCCGCTCTAACCCCTCTCCCCTCTATTTCACGCGGACGAATTGTTCGGTAGCAGGGACAGCATCACTAGCAATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATCGATTCACTATGGCGGGAATCGAATGACTCCTCATGGATGCGCATGCCGGATGCGGTGTAAACACCGATGAACATCTGCGTCGCACCGGCGCGCGAAAACCTCACCCGCACATCAATGTAGGTGCCGTCATCGAGGAATTCTTCGTGGTTTCGGTAGTGAAGCGCTGG  >  NC_002947/4422667‑4422952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.