| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4450402 = | 23 (1.000) | 3 (0.140) | 5/240 | NT | 11.1% | coding (432/474 nt) | nicA | nicotinate dehydrogenase subunit A |
| ? | NC_002947 | 4450420 = | 26 (1.170) | coding (450/474 nt) | nicA | nicotinate dehydrogenase subunit A | |||||
GGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAA > NC_002947/4450271‑4450565 | acgcccttggccacagggcctgagggcggggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcaGCGCGCCGTGCGCCGCGCt > 2:33358‑M1/132‑150 (MQ=255) gcccttggccacagggcctgagggcggggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcagcgcgccgtgcgccgcgcTGc < 1:345290‑M2/3‑1 (MQ=255) cTGCAGGAACGGCATGAGCATGACCGCCAAGCACCTGCTCGATCGCAGTCCCGCGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCga < 2:506722/150‑1 (MQ=255) tGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCgag > 1:542066/1‑150 (MQ=255) cATGACCGGCATGATCATGACCGCCAAGGCGCTGCTCGATCCCATTCCCGAGCCCAGCGCCGAACAGATTCGCAATGTGCTGTCCGCCAACCTGTGCCGCTGCGGCACCAACGTCGAGATCCTGCGCGCCGTGCGCCGCGCTGCCgaggg > 1:506722/1‑148 (MQ=255) cATGATCATGACCGCCAAGGCCCTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGaaa > 1:426144/1‑150 (MQ=255) cctgagggcggggtgatctggtcgacgatcagcaacacgccggtcttggccagcagttggtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcagcgcgccgtgcgccgcgcTGCCGAGACCCGGAGAAAg < 2:470916‑M2/19‑1 (MQ=255) aTCATGACCGCCAAGGCCCTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCa > 1:57033/1‑150 (MQ=255) cGCCAAGGCCCTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCAc > 1:282747/1‑150 (MQ=255) cGCCAAGGCCCTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCAc < 2:426144/150‑1 (MQ=255) ccTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCTGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAg < 1:213649/150‑1 (MQ=255) ccTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAg < 2:542066/150‑1 (MQ=255) ccTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAg < 2:472242/150‑1 (MQ=255) tCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCCGc > 2:4/1‑150 (MQ=255) tCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGc > 1:268189/1‑150 (MQ=255) ttCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCg > 2:124731/1‑109 (MQ=255) ttCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCg < 1:124731/109‑1 (MQ=255) cAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGAGCAACTGCGGGCCAAGACCg < 2:551018/150‑1 (MQ=255) gtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcagcgcgccgtgcgccgcgcTGc > 1:482647‑M2/73‑75 (MQ=255) gtcgcggctgggcacctgttgtgagtggttcatggctttctccgggtctcggcagcgcgccgtgcgccgcgcTGc < 2:482647‑M2/3‑1 (MQ=255) tGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTg > 1:400066/1‑150 (MQ=255) tGTCCGTCAACCTGTGCCGCTGCGGCACCCACGTCGAACTCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGAGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGAtcgt > 2:278355/1‑150 (MQ=255) cGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTACGCGCCGTGCGCCGCGCTGCCGAGACCCGCAGAAAGCCATGAACCACTCACAACAGGTGCCCACCGGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGAc > 1:194427/1‑150 (MQ=255) ccAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCa > 1:341536/1‑150 (MQ=255) ctaccccTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCAcc > 2:402657/7‑150 (MQ=255) gCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACGCGGAGAAAGCCATGAACCACTGCCAACAGGTGCCCAGCCGAGACGAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCAcccc > 2:146377/1‑150 (MQ=255) ctttctccgggtctcggcaGCGCGGCGCACGGCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAgg < 2:470916‑M1/131‑1 (MQ=255) aCGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCtgt < 2:57033/150‑1 (MQ=255) tCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGc > 2:503075/1‑150 (MQ=255) gcaGCGCGGCGCACGGCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGAc < 2:482647‑M1/72‑1 (MQ=255) gcaGCGCGGCGCACGGCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGAc > 1:482647‑M1/4‑75 (MQ=255) gcaGCGCGGCGCACGGCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGc < 1:345290‑M1/147‑1 (MQ=255) agcgcggcgcacggcgcgcTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGt > 2:33358‑M2/20‑150 (MQ=255) cgcggcgcacggcgcgcTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGa < 1:33358‑M2/133‑1 (MQ=255) cGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTca < 1:63980/45‑1 (MQ=255) cGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTca > 2:63980/1‑45 (MQ=255) gTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTa < 2:268189/150‑1 (MQ=255) gcgcTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCaa < 1:528098‑M2/146‑1 (MQ=255) | GGTTACTGCATGAACGGCATGATCATGACCGCCAAGGCCCTGCTCGATCGCATTCCCGAGCCCAGCGACGAACAGATTCGCAATGAGCTGTCCGCCAACCTGTGCCGCTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAA > NC_002947/4450271‑4450565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |