New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	673262 =	32 (1.380)	3 (0.140)	3/238	NT	9.2%	coding (261/777 nt)	PP_0574	LuxR family transcriptional regulator
	?	NC_002947	673328 =	29 (1.320)					coding (195/777 nt)	PP_0574	LuxR family transcriptional regulator

GCTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGGT  >  NC_002947/673186‑673475                                                                                                                                               |                                                                                                                                                    cgacgaagccatcgagcactatgtggcagacccgaccatcggcttgctcatctgtgacctgcacatgcccgatcggGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCgg                                                                                                                                              >  2:264172‑M1/77‑150 (MQ=255)    tCTGTTAGGATTCGGCAAAACCTTTGCGTATCGCCCGGATCAAGTCCTCTTTCTAGGCACGCCCTGTCAACATGATGACTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTGCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCa                                                                                                                                           <  2:262151/150‑1 (MQ=255)        gtagtaATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCAtgtg                                                                                                                                       >  2:437257/1‑150 (MQ=255)           atcgagcactatgtggcagacccgaccatcggcttgctcatctgtgacctgcacatgcccgatcggGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAg                                                                                                                                    >  2:358246‑M1/67‑150 (MQ=255)              aTCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCgg                                                                                                                                              <  2:486750/137‑1 (MQ=255)              aTCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCgg                                                                                                                                              >  1:486750/1‑137 (MQ=255)               tCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTca                                                                                                                                <  1:95459/150‑1 (MQ=255)                    aaaaCCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGAt                                                                                                                           <  1:36943/150‑1 (MQ=255)                    aaaaCCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGAt                                                                                                                           <  1:437257/150‑1 (MQ=255)                     aaaCCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATg                                                                                                                          <  1:144691/150‑1 (MQ=255)                                  tCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATgg                                                                                                             <  2:283573/150‑1 (MQ=255)                                            cAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGc                                                                                                   <  2:94259/150‑1 (MQ=255)                                                tCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCcaca                                                                                               >  1:161463/1‑150 (MQ=255)                                                 ccTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATg                                                                                                              >  1:112064/1‑134 (MQ=255)                                                 ccTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATg                                                                                                              <  2:112064/134‑1 (MQ=255)                                                  cTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATa                                                                                             >  1:391101/1‑150 (MQ=255)                                                   tGTTCCGCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGGGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAg                                                                                            <  2:280048/150‑1 (MQ=255)                                                    gTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGt                                                                                           <  2:419504/150‑1 (MQ=255)                                                    gTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTAACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGt                                                                                           >  1:340833/1‑150 (MQ=255)                                                          cGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGa                                                                                     <  2:43194/150‑1 (MQ=255)                                                           ggCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGAt                                                                                    >  1:389392/1‑150 (MQ=255)                                                           ctgcacatgcccgatcgggatggcatcgagctggtgcgcgccttgaaggaaatcaacggcagccagcgcacgttcgaagccatcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGAt                                                                                    >  2:358246‑M2/85‑150 (MQ=255)                                                                     ccgatcgggatggcatcgagctggtgcgcgccttgaaggaaatcaacggcagccagcgcacgttcgaagccatcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTtcgtcg                                                                          >  2:264172‑M2/75‑150 (MQ=255)                                                                        aaCATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTcaca                                                                                                                              <  1:302110/95‑1 (MQ=255)                                                                        aaCATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTcaca                                                                                                                              >  2:302110/1‑95 (MQ=255)                                                                        aaCATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGtt                                                                       >  1:506987/1‑150 (MQ=255)                                                                        aaCATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGtt                                                                       <  2:391101/150‑1 (MQ=255)                                                                             GATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGagag                                                                  <  2:277906‑M1/150‑1 (MQ=255)                                                                                 GCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCt                                                              >  1:277906‑M1/1‑150 (MQ=255)                                                                                        aCGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGc                                                                                                                   <  1:384868/90‑1 (MQ=255)                                                                                        aCGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGc                                                                                                                   >  2:384868/1‑90 (MQ=255)                                                                                          tggtgcgcgccttgaaggaaatcaacggcagccagcgcacgttcgaagccatcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAg                                                     <  1:358246‑M2/97‑1 (MQ=255)                                                                                                                 cTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGaa                              <  2:506987/150‑1 (MQ=255)                                                                                                                  tctaaGGCGCGACCCAGCTCGATGGAATCGCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTATGCCACGTAGTGCTCGATGGCTTCGTCGGTTGAGATGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAAt                             <  2:161463/147‑1 (MQ=255)                                                                                                                                cAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTc               >  1:439627/1‑150 (MQ=255)                                                                                                                                 aGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCg              >  1:544303/1‑150 (MQ=255)                                                                                                                                      gATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAAt         >  2:47396/1‑150 (MQ=255)                                                                                                                                            atcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCgg   >  1:317460‑M2/4‑150 (MQ=255)                                                                                                                                            atcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCgg   >  1:203358‑M2/4‑150 (MQ=255)                                                                                                                                             tcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGGt  <  1:47396‑M2/148‑1 (MQ=255)                                                                                                                                             tcCCGATCGGGCATGTGCAGGTAACAGATGAGCAAGCCGATGGGCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAAtgaccaac  <  2:127600‑M2/148‑4 (MQ=255)                                                                                                                                               |                                                                                                                                                    GCTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGAGGAATTCACTCAGCTGTTCGACAATGACCGGT  >  NC_002947/673186‑673475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.