New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 322577 =19 (0.820)3 (0.130) 3/244 NT 13.3% coding (1666/2070 nt) PP_0267 ferric siderophore receptor
?NC_002947 322613 = 21 (0.940)coding (1630/2070 nt) PP_0267 ferric siderophore receptor

GAAATAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGAACTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/322730‑322577
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTT  >  NC_002947/322613‑322719
                                                                                                                                                                                                                                                                     
GAAATAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGATCTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAG                                                                                                                 >  1:248146/1‑150
    TAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGAACTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGA                                                                                                             <  2:604649/150‑1
                                                                                                               ATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTT  >  2:471699/1‑150
                                                                                                                                   GCGTTCACGCGGCATCGAGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGAT                                             >  1:559381/1‑87
                                                                                                                                   GCGTTCACGCGGCATCGAGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGAT                                             <  2:559381/87‑1
                                                                                                                                                                                                                                                                     
GAAATAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGAACTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/322730‑322577
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTT  >  NC_002947/322613‑322719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.