New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 322577 = | 19 (0.820) | 3 (0.130) | 3/244 | NT | 13.3% | coding (1666/2070 nt) | PP_0267 | ferric siderophore receptor |
? | NC_002947 | 322613 = | 21 (0.940) | coding (1630/2070 nt) | PP_0267 | ferric siderophore receptor |
GAAATAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGAACTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/322730‑322577 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTT > NC_002947/322613‑322719 GAAATAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGATCTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAG > 1:248146/1‑150 TAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGAACTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGA < 2:604649/150‑1 ATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTT > 2:471699/1‑150 GCGTTCACGCGGCATCGAGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGAT > 1:559381/1‑87 GCGTTCACGCGGCATCGAGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGAT < 2:559381/87‑1 GAAATAGGCGTAAAGAGCGACTGGTTGGATCAGCGCCTGACCACCACCCTGGCCATCTACGAGCTGGAACTTTACAACCGCCGCACCCGCGACCCAAACGACCCGAACATCATCTTGCTCAGCGGCATGCAGCGTTCACGCGGCATCGAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/322730‑322577 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTT > NC_002947/322613‑322719 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |