New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	322577 =	19 (0.820)	3 (0.130)	3/244	NT	13.3%	coding (1666/2070 nt)	PP_0267	ferric siderophore receptor
	?	NC_002947	322613 =	21 (0.940)					coding (1630/2070 nt)	PP_0267	ferric siderophore receptor

CCAGGTCACGAACAGGCTGCCATTGCGCTTGGCCACGTCATTGATGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTTACGCCTA  >  NC_002947/322431‑322726                                                                                                                                                   |                                                                                                                                                      ccAGGTCACGAACAGGCTGCCATTGCGCTTGGCCACGTCATTGATGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGCCGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAg                                                                                                                                                    <  2:127054/150‑1 (MQ=255)                           gcTTGGCCACGTCATTGATGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGc                                                                                                                          >  1:485767/1‑150 (MQ=255)                            cTTGGCCACGTCATTGATGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGAAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGcc                                                                                                                         >  2:259638/1‑150 (MQ=255)                                 ccACGTCATTGATGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGa                                                                                                                    >  2:239905/1‑150 (MQ=255)                                   aCGTCATTGATGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGc                                                                                                                  >  2:590427/1‑150 (MQ=255)                                        aaagagcgactggttggatcagcgcctgaccaccaccctggccatctacgagctggaactttacaaccgccgcacccgcgacccaaacgacccgaacatcatcttgcTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAgat                                                                                                             >  2:471699‑M1/108‑150 (MQ=255)                                             tGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGCGCAAGATGATGt                                                                                                        >  1:134605/1‑150 (MQ=255)                                              gCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGtt                                                                                                       <  1:415926/150‑1 (MQ=255)                                                 gTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCgg                                                                                                    <  2:452164/150‑1 (MQ=255)                                                       ttCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGc                                                                                                                                                   <  1:14179/97‑1 (MQ=255)                                                       ttCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGc                                                                                                                                                   >  2:14179/1‑97 (MQ=255)                                                       ttCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAAGTCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGtt                                                                                              >  2:392974/1‑150 (MQ=255)                                                        tCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGttt                                                                                             <  2:134605/150‑1 (MQ=255)                                                         ccTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTg                                                                                            <  1:239905/150‑1 (MQ=255)                                                            ggCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGt                                                                                         >  1:432816/1‑150 (MQ=255)                                                                                   atctacgagctggaactttacaaccgccgcacccgcgacccaaacgacccgaacatcatcttgcTCAGCTCGATGCCGCGTGAACGc                                                                                                                                 >  1:559381‑M1/65‑87 (MQ=255)                                                                                   atctacgagctggaactttacaaccgccgcacccgcgacccaaacgacccgaacatcatcttgcTCAGCTCGATGCCGCGTGAACGc                                                                                                                                 <  2:559381‑M1/23‑1 (MQ=255)                                                                                             gCAGGACAATGCCGCCGCGTACATACCAGTGCCCGACGATGTTGCCGGTGGCATTCAGCTCGATGCCGCGTGAACGCTGCATGCGGCTGAGCAAGATGAGGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGt                                                        <  1:585662/150‑1 (MQ=255)                                                                                                               gTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGc                                                            <  2:116124/128‑1 (MQ=255)                                                                                                               gTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGc                                                            >  1:116124/1‑128 (MQ=255)                                                                                                                   aTACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGAAGGGACGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAg                                  >  1:193627/1‑150 (MQ=255)                                                                                                                          ttGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGa                           <  1:259638/150‑1 (MQ=255)                                                                                                                           tGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGAt                          <  1:590427/150‑1 (MQ=255)                                                                                                                             ccGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATcc                        <  2:432816/150‑1 (MQ=255)                                                                                                                             ccGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATcc                        <  2:485767/150‑1 (MQ=255)                                                                                                                                                  gTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGATCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTTACGCCt   >  2:248146/1‑150 (MQ=255)                                                                                                                                                   TCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTTACGCCTa  <  2:604649‑M1/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      CCAGGTCACGAACAGGCTGCCATTGCGCTTGGCCACGTCATTGATGCGGTTGCCTTCCTGGCCGTTATTGTCCTTGACGATGATCGCATCCTGCAGGCCAATGCCGCCGCGTACATACCAGTTGCCGACGATGTTGCCGGTGGCAGTCAGCTCGATGCCGCGTGAACGCTGCATGCCGCTGAGCAAGATGATGTTCGGGTCGTTTGGGTCGCGGGTGCGGCGGTTGTAAAGTTCCAGCTCGTAGATGGCCAGGGTGGTGGTCAGGCGCTGATCCAACCAGTCGCTCTTTACGCCTA  >  NC_002947/322431‑322726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.