| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 617041 = | 13 (0.560) | 4 (0.180) | 3/246 | NT | 21.9% | coding (366/981 nt) | PP_0531 | hypothetical protein |
| ? | NC_002947 | 617114 = | 16 (0.710) | coding (439/981 nt) | PP_0531 | hypothetical protein | |||||
TGGACCTCGCTCTGATAGCCCTTCAGGGCGGCATCAGGTGGAAAATCAGCGAAATGAGGGCTGTCGAGCGCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/617115‑617041‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAAGAGGCGCAAATCAATGGCAGGTCCATCATCGATGC > NC_002947/617114‑617259 TGGACCTCGCTCTGATAGCCCTTCAGGGCGGCATCAGGTGGAAAATCAGCGAAATGAGGGCTGTCGAGCGCGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACT > 1:479924/1‑109TGGACCTCGCTCTGATAGCCCTTCAGGGCGGCATCAGGTGGAAAATCAGCGAAATGAGGGCTGTCGAGCGCGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACT < 2:479924/109‑1 GACCTCGCTCTGATAGCCCTTCAGGGCGGCATCAGGTGGAAAATCAGCGAAATGAGGGCTGTCGAGCGCGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATta < 1:116996/150‑3 GACCTCGCTCTGATAGCCCTTCAGGGCGGCATCAGGTGGAAAATCAGCGAAATGAGGGCTGTCGAGCGCGGTCCATCTGATCGCGGGTCAGAAAGAATTCAGCCACTTGTCGACCTTGGACCGTGGGGTGAACCGTGTACGCAATCAGGA > 2:116996/1‑150 GGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAAGAGGCGCAAATCAATGGCAGGTCCATCATCGATGC < 2:253325/150‑1 TCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAA < 1:259815/113‑1 TCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAA > 2:259815/1‑113 TGGACCTCGCTCTGATAGCCCTTCAGGGCGGCATCAGGTGGAAAATCAGCGAAATGAGGGCTGTCGAGCGCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/617115‑617041‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAAGAGGCGCAAATCAATGGCAGGTCCATCATCGATGC > NC_002947/617114‑617259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |