| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 617041 = | 13 (0.560) | 4 (0.180) | 3/246 | NT | 21.9% | coding (366/981 nt) | PP_0531 | hypothetical protein |
| ? | NC_002947 | 617114 = | 16 (0.710) | coding (439/981 nt) | PP_0531 | hypothetical protein | |||||
TGGCGCCTGGGGGCAATGATTTGCACGTATGCGATGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAAGAGGCGCAAATCAATGGCAGGTCCATCATCGATGC > NC_002947/616979‑617259 | gggCGCCTGGGGGCAATGATTTGCACGTATGCGATGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCgtgt < 2:88665/149‑1 (MQ=255) cTGGGGGCAATGATTTGCACGTATGCGATGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCagaaa > 2:492316/1‑150 (MQ=255) gCAATGATTTGCACGTATGCGATGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCCGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTc < 1:492316/150‑1 (MQ=255) aaTGATTTGCACGTATGCGATGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAg > 1:576462/1‑150 (MQ=255) agtggctgaattctttctgacacgcaatcagatgGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCa < 2:479924‑M1/75‑1 (MQ=255) agtggctgaattctttctgacacgcaatcagatgGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCa > 1:479924‑M1/35‑109 (MQ=255) cGATGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTgg > 2:452153/1‑150 (MQ=255) tGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGAcc > 1:507563/1‑150 (MQ=255) aaaaCAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCgtg < 1:452153/150‑1 (MQ=255) aaaCAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCgtgt < 1:509493/150‑1 (MQ=255) cAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGt < 1:234540/150‑1 (MQ=255) atcatcatGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGtt > 1:253325/1‑150 (MQ=255) atcatcatGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGtt < 2:576462/150‑1 (MQ=255) tggacctcgctctgatagcccttcagggcggcatcaggtggaaaatcagcgaaatgagggctgtcgagcgcggtcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACt > 1:479924‑M2/76‑109 (MQ=255) tggacctcgctctgatagcccttcagggcggcatcaggtggaaaatcagcgaaatgagggctgtcgagcgcggtcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACt < 2:479924‑M2/34‑1 (MQ=255) gacctcgctctgatagcccttcagggcggcatcaggtggaaaatcagcgaaatgagggctgtcgagcgcggtcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATcatta < 1:116996‑M2/77‑3 (MQ=255) gacctcgctctgatagcccttcagggcggcatcaggtggaaaatcagcgaaatgagggctgtcgagcgcggtcCATCTGATCGCGGGTCAGAAAGAATTCAGCCACTTGTCGACCTTGGACCGTGGGGTGAACCGTGTACGCAATCAGGa > 2:116996‑M2/74‑150 (MQ=255) aCAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCgtg > 1:362250/1‑150 (MQ=255) cccTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGtt > 2:140163/1‑124 (MQ=255) cccTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGtt < 1:140163/124‑1 (MQ=255) tCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCgtgt > 1:481559/1‑108 (MQ=255) tCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCgtgt < 2:481559/108‑1 (MQ=255) ggtcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAAGAGGCGCAAATCAATGGCAGGTCCATCATCGATGc < 2:253325‑M2/146‑1 (MQ=255) tcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGaa > 2:259815‑M2/3‑113 (MQ=255) tcCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGaa < 1:259815‑M2/111‑1 (MQ=255) | TGGCGCCTGGGGGCAATGATTTGCACGTATGCGATGGAAAACAAATACAACATCATCATGGAGACCGCGCTCGACAGCCCTCATTTCGCTGATTTTCCACCTGATGCCGCCCTGAAGGGCTATCAGAGCGAGGTCCATCTGATTGCGTGTCAGAAAGAATTCAGCCACTGGTCGACCCTGGACCGTGTGGTCAACAGTGTTGGCAATCATGAGCTCGAGCGTGTGGTCAGCCTGACGCAGATCGAAGAGGCGCAAATCAATGGCAGGTCCATCATCGATGC > NC_002947/616979‑617259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |