| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2056021 | 19 (0.820) | 3 (0.150) | 3/222 | NT | 14.8% | intergenic (+27/‑116) | aroC/PP_1831 | chorismate synthase/membrane protein |
| ? | NC_002947 | = 2056095 | 18 (0.880) | intergenic (+101/‑42) | aroC/PP_1831 | chorismate synthase/membrane protein | |||||
GTGCGTGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2055865‑2056021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCACATCGGCATTCTG < NC_002947/2056095‑2055947 GTGCGTGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTT > 2:53746/1‑150 TGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGG < 2:587787/150‑1 CGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCG < 1:123135/150‑1 CAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTA > 2:440401/1‑150 GTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTG < 1:440401/150‑1 GGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGC > 1:33615/1‑150 CTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCACA > 1:51283/1‑150 CTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCACATC < 1:245236/150‑1 TTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCACATCG > 2:158694/1‑150 GGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGCACAATTGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCACATCGGCATT < 1:497174/150‑1 TGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCACATCGGCATTCTG > 2:360604/1‑150 GTGCGTGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2055865‑2056021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCACATCGGCATTCTG < NC_002947/2056095‑2055947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |