New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2653644 =	19 (0.820)	4 (0.200)	4/222	NT	19.7%	intergenic (+40/‑85)	PP_2325/PP_2326	2‑dehydropantoate 2‑reductase/universal stress protein
	?	NC_002947	2653686 =	16 (0.790)					intergenic (+82/‑43)	PP_2325/PP_2326	2‑dehydropantoate 2‑reductase/universal stress protein

CGCGCCAGGGCCAGCGCATGTTGCATCACGAAAGGGGCGTAGACACCGAGGTCGGTGGCGTACAGCATGGAGCGGATCATTCGACCTCCTCGACTGCCGCAGCGGCAGAGCAAGCTTCAGCTTAGCAGCGCGCCGGACGCTCGCTTTGC‑‑‑CGTCCGGCGCGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2653808‑2653644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtccggcgcgctgctAAGCTGAAGCTTGCTCTGCCGCTGCGGCAGTCGAGGAGGTCGAATGATCCGCTCCATGCTGTACGCCACCGACCTCGGTGTCTACGCCCCTTTCGTGATGCAACATGCGCTGGCCCTGGCGCGCACGTTCGGTGCCGAGTTGT  >  NC_002947/2653686‑2653828                                                                                                                                                                                                                                                                                                                         CGCGCCAGGGTCAGCGCATGTTGCATCACGAAAGGGGCGTAGACACCGAGGTCGGTGGCGTACAGCATGGAGCGGATCATTCGACCTCCTCGACTGCCGCAGCGGCAGATCAAGCTTCAGCTTAGCAGCGCGCCGGACGCTCGCTTTGC‑‑‑C                                                                                                                                                                <  1:582825/150‑1        GGGCCAGCGCATGTTGCATCACGAAAGGGGCGTAGACACCGAGGTCGGTGGCGTACAGCATGGAGCGGATCATTCGACCTCCTCGACTGCCGCAGCGGCAGAGCAAGCTTCAGCTTAGCAGCGCGCCGGACGCTCGCTTTGC‑‑‑CGTCCGGC                                                                                                                                                         <  1:554024/150‑1                            ACGAAAGGGGCGTAGACACCGAGGTCGGTGGCGTACAGCATGGAGCGGATCATTCGACCTCCTCGACTGCCGCAGCGGCAGAGCAAGCTTCAGCTTAGCAGCGCGCCGGACG‑‑‑GCAAAGCGAGCGTCCGGCGCGCTGCTAAGCTGAAGCTT                                                                                                                                     <  1:292161/150‑1                                                                                                                        GCTTAGCAGCGCGCCGGACGCTCGCTTTGC‑‑‑CGTCCGGCGCGCTGCTAAGCTGAAGCTTGCTCTGCCGCTGCGGCAGTCGAGGAGGTCGAAT                                                                                                    >  1:515365/1‑91                                                                                                                        GCTTAGCAGCGCGCCGGACGCTCGCTTTGC‑‑‑CGTCCGGCGCGCTGCTAAGCTGAAGCTTGCTCTGCCGCTGCGGCAGTCGAGGAGGTCGAAT                                                                                                    <  2:515365/91‑1                                                                                                                                             TCGCTTTGC‑‑‑CGTCCGGCGCGCTGCTAAGCTGAAGCTTGCTCTGCCGCTGCGGCAGTCGAGGAGGTCGAATGATCCGCTCCATGCTGTACGCCACCGACCTCGGTGTCTACGCCCCTTTCGTGATGCAACATGCGCTGGCCCTGGCGCGCA                    >  2:427603/1‑150                                                                                                                                                                  CGCTGCTAAGCTGAAGCTTGCTCTGCCGCTGCGGCAGTCGAGGAGGTCGAATGATCCGCTCCATGCTGTACGCCACCGACCTCGGTGTCTACGCCCCTTTCGTGATGCAACATGCGCTGGCCCTGGCGCGCACGTTCGGTGCCGAGTTGT  <  1:316584/150‑1                                                                                                                                                                                                                                                                                                                         CGCGCCAGGGCCAGCGCATGTTGCATCACGAAAGGGGCGTAGACACCGAGGTCGGTGGCGTACAGCATGGAGCGGATCATTCGACCTCCTCGACTGCCGCAGCGGCAGAGCAAGCTTCAGCTTAGCAGCGCGCCGGACGCTCGCTTTGC‑‑‑CGTCCGGCGCGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2653808‑2653644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtccggcgcgctgctAAGCTGAAGCTTGCTCTGCCGCTGCGGCAGTCGAGGAGGTCGAATGATCCGCTCCATGCTGTACGCCACCGACCTCGGTGTCTACGCCCCTTTCGTGATGCAACATGCGCTGGCCCTGGCGCGCACGTTCGGTGCCGAGTTGT  >  NC_002947/2653686‑2653828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.