New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6006595 = | 12 (0.510) | 7 (0.420) | 7/182 | NT | 59.4% | intergenic (+7/+92) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator |
? | NC_002947 | 6006679 = | 1 (0.060) | intergenic (+91/+8) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator |
AGCGGTTGCGGCGGTTGAGTGCGTTCCTGGAAGGCGAGGTGGCGGCAATGGATTTGCCGGATGTGGAAATCCTGCCGCGTCTTTGATCACCTGCACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6006772‑6006595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcgagcccgcgaagaggccggtGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTG > NC_002947/6006679‑6006822 AGCGGTTGCGGCGGTTGAGTGCGTTCCTGGAAGGCGAGGTGGCGGCAATGGATTTGCCGGATGTGGAAATCCTGCCGCGTCTTTGATCACCTGCACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCTGTACCTGTGG < 2:517042/150‑1 CGTTACTGGAAGGCGACGTGGCGGCCATGGATTTGGCGGATTTGGAAATCCTGCCGCGTCTTTGATCACCTGCACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCGCATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGA < 2:88424/150‑1 GAAATCCTGCCGCGTCTTTGATCACCTGCACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAG < 1:265248/96‑1 GAAATCCTGCCGCGTCTTTGATCACCTGCACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAG > 2:265248/1‑96 CCGCTCCCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGG > 1:292557/1‑100 CCGCTCCCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGG < 2:292557/100‑1 TCCCACAGTTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCAGCAGGATTTCCACATCCGGCAAATCCAT < 1:442565/105‑1 TCCCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCAGCAGGATTTCCACATCCGGCAAATCCAT > 2:442565/1‑105 CCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCT > 1:123295/1‑150 CACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTC < 1:558233/114‑1 CACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTC > 2:558233/1‑114 GCGGGCTCGCCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCA > 1:170110/1‑150 GCGAGCCCGCGAAGAGGCCGGTGCAGGTAATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTA > 2:97492/1‑150 CCCGCGAAGAGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAAT > 2:351168/1‑150 GCCGGTGCAGGTGATCAAAGACGCGGCCGGATTAACACATTCGGCAAGTCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTG > 1:423786/1‑150 AGCGGTTGCGGCGGTTGAGTGCGTTCCTGGAAGGCGAGGTGGCGGCAATGGATTTGCCGGATGTGGAAATCCTGCCGCGTCTTTGATCACCTGCACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6006772‑6006595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcgagcccgcgaagaggccggtGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTG > NC_002947/6006679‑6006822 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |