New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6121904 = | 29 (1.240) | 5 (0.230) | 5/242 | NT | 16.0% | coding (302/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase |
? | NC_002947 | 6121950 = | 25 (1.130) | coding (256/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase |
ATCGGTAGCGGCCATGCCGGCTACGGCCTGGCACAGGCCCTGCGCAA‑‑‑‑‑GGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6121956‑6121904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAG > NC_002947/6121950‑6122094 ATCGGTAGCGGCCATGCCGGCTACGGCCTGGCACAGGCCCTGCGCAA‑‑‑‑‑GGCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAG > 2:509695/1‑150 GCGGCCATGCCGGCTACGGCCTGGCACAGGCCCTGCGCAA‑‑‑‑‑GGCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATC < 1:509695/150‑1 CGGCCATGCCGGCTACGGCCTGGCACAGGCCCTGCGCAA‑‑‑‑‑GGCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCA > 2:552936/1‑150 CCATGCCGGCTACGGCCTGGCACAGGCCCTGCGCAAGGCATGGCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTG < 1:349079/92‑1 CCATGCCGGCTACGGCCTGGCACAGGCCCTGCGCAAGGCATGGCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTG > 2:349079/1‑92 GGCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATA > 1:186735/1‑150 GCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAG > 1:345823/1‑150 GCCGCTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGACGACCTTGCACTCAGGGCATAG > 2:38963/1‑150 ATCGGTAGCGGCCATGCCGGCTACGGCCTGGCACAGGCCCTGCGCAA‑‑‑‑‑GGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6121956‑6121904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcTACCGATGATGACCACCGGTTGGGCGGGACGAGCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAG > NC_002947/6121950‑6122094 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |