New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4065632 =	27 (1.160)	3 (0.130)	3/246	NT	10.5%	coding (372/1491 nt)	PP_3582	RND transporter outer membrane protein
	?	NC_002947	4065689 =	25 (1.110)					coding (315/1491 nt)	PP_3582	RND transporter outer membrane protein

AGGGTTTCGCGCAGCTTGCCCCACAGGTCGATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCC  >  NC_002947/4065486‑4065779                                                                                                                                                   |                                                                                                                                                    ccgaaggctggacccaggcctcgccgtccgacgccatcgcccgcggcgcctggtgggaaatctacggcgatgctgggctcaatgcgctggtcgaagagctcaaccgcagcaaccagaccgtggcgcaatcagaagcccagtatcgcCAgg                                                                                                                                                  <  1:483520‑M1/4‑1 (MQ=255)           gcAGCTTGCCCCACAGGTCGATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTgg                                                                                                                                        >  2:418780/1‑150 (MQ=255)                  gCCCCACAGGTCGATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAg                                                                                                                                 <  1:280703/150‑1 (MQ=255)                    cccACAGGTCGATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAgcg                                                                                                                               >  1:600986/1‑150 (MQ=255)                     ccACAGGTCGATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAgcgc                                                                                                                              >  1:219789/1‑150 (MQ=255)                     ccACAGGTCGATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAgcgc                                                                                                                              <  1:268408/150‑1 (MQ=255)                              gATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGgct                                                                                                                     >  2:235143/1‑150 (MQ=255)                                               ccAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcct                                                                                                    >  2:484067/1‑150 (MQ=255)                                               ccAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcct                                                                                                    >  1:364128/1‑150 (MQ=255)                                                    tGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcctgggcc                                                                                               >  1:247167/1‑150 (MQ=255)                                                    tGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcctgggcc                                                                                               >  1:481376/1‑150 (MQ=255)                                                       gggaaatctacggcgatgctgggctcaatgcgctggtcgaagagctcaaccgcagcaaccagaccgtggcgcaatcagaagcccagtatcgcCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcctgggcctgg                                                                                            >  2:415961‑M1/93‑150 (MQ=255)                                                                   ttGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCt                                                                                >  1:148808/1‑150 (MQ=255)                                                                   ttGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCt                                                                                >  1:553749/1‑150 (MQ=255)                                                                     gCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTc                                                                              >  2:400389/1‑150 (MQ=255)                                                                      cGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCt                                                                             <  1:418780/150‑1 (MQ=255)                                                                      cGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCt                                                                             <  1:400389/150‑1 (MQ=255)                                                                              ctcaatgcgctggtcgaagagctcaaccgcagcaaccagaccgtggcgcaatcagaagcccagtatcgcCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcctgg                                                                                                  <  1:292719‑M1/52‑1 (MQ=255)                                                                              ctcaatgcgctggtcgaagagctcaaccgcagcaaccagaccgtggcgcaatcagaagcccagtatcgcCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCgcctgg                                                                                                  >  2:292719‑M1/70‑121 (MQ=255)                                                                                           gACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTtg                                                        >  2:422082/1‑150 (MQ=255)                                                                                             cAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGGtgct                                                      >  2:3704/1‑150 (MQ=255)                                                                                               ggCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTtgctgc                                                    <  2:481376/150‑1 (MQ=255)                                                                                                 cTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCTCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGGTGCTGCgg                                                  >  1:502488/1‑150 (MQ=255)                                                                                                      aCTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAg                                             >  2:490257/1‑150 (MQ=255)                                                                                                               gCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGAc                                    >  1:73629/1‑150 (MQ=255)                                                                                                                  ggTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAg                                 <  2:247167/150‑1 (MQ=255)                                                                                                                   gTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAgc                                <  2:219789/150‑1 (MQ=255)                                                                                                                   gTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAgc                                <  1:422082/150‑1 (MQ=255)                                                                                                                        cTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCAtt                           >  1:54284/1‑150 (MQ=255)                                                                                                                                          gCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGAc                                    <  2:20223/123‑1 (MQ=255)                                                                                                                                          gCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGAc                                    >  1:20223/1‑123 (MQ=255)                                                                                                                                                 cTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCGGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTcc  >  1:235435/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                    AGGGTTTCGCGCAGCTTGCCCCACAGGTCGATCTCCCAGCTCACGCCCAACTGCGCGTTGTAGGTGTTGCGAATGCCGCTGCTGTTATTGGACAGGCTGGAACTGGAGCTGCCGGTGCCCTGCGCCGAGCGGTTCTTGCTGGTGCTCAGGTCCAGGCTGGGGAACAGCGCCGCACGGCTGCTGCGCACCAGCGCCTGGGCCTGGCGATACTGGGCTTCTGATTGCGCCACGGTCTGGTTGCTGCGGTTGAGCTCTTCGACCAGCGCATTGAGCCCAGCATCGCCGTAGATTTCC  >  NC_002947/4065486‑4065779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.