| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4504189 | 29 (1.240) | 4 (0.180) | 4/244 | NT | 14.3% | coding (297/393 nt) | tusD | sulfur transfer protein complex subunit TusD |
| ? | NC_002947 | = 4504239 | 20 (0.890) | coding (347/393 nt) | tusD | sulfur transfer protein complex subunit TusD | |||||
GACGAACTGGACGTGGCTGGCCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCC > NC_002947/4504055‑4504337 | gccGAAATGGACCTGGTTAGCCATTGACGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAg > 2:531044/3‑150 (MQ=255) aCGAACTGGACGTGGCTGGCCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGc < 2:431428/150‑1 (MQ=255) aCTGGACGTGGCTGGCCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTg < 2:278813/150‑1 (MQ=255) cTGGACGTGGCTGGCCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTgg > 2:54349/1‑150 (MQ=255) ggACGTGGCTGGCCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTg > 2:219947/1‑147 (MQ=255) ggACGTGGCTGGCCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTg < 1:219947/147‑1 (MQ=255) tggcCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCggg > 2:203918/1‑150 (MQ=255) ggcCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCgggg < 2:318446/150‑1 (MQ=255) aGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTgg < 1:54349/150‑1 (MQ=255) tGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGc < 1:495199/150‑1 (MQ=255) ggCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCAAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGcc < 2:284850/150‑1 (MQ=255) aCCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGCCGAAGCCGAGGCAAAATTGTACGGACTGGCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCcgcg > 1:533413/1‑150 (MQ=255) aGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTgg < 1:529421/150‑1 (MQ=255) aGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTgg > 1:562825/1‑150 (MQ=255) gtggtgTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCtt < 1:531044/150‑1 (MQ=255) gtgtgtATCGCCGCCGCCCTGCGCCGTGGCGTACTCTACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTc < 1:189869/150‑1 (MQ=255) aTCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTc < 1:224627/150‑1 (MQ=255) ccgccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGcc < 2:220517/73‑1 (MQ=255) ccgccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGcc > 1:220517/1‑73 (MQ=255) ccgccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCgggg > 2:245212/1‑95 (MQ=255) ccgccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCgggg < 1:245212/95‑1 (MQ=255) gccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCtcgtgcagttggcccagccccgacagttcccagggcttgggcaggttcacggc > 1:363041‑M1/1‑60 (MQ=255) gccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCtcgtgcagttggcccagccccgacagttcccagggcttgggcaggttcacggc < 2:363041‑M1/113‑54 (MQ=255) gccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCC < 2:118546‑M1/60‑1 (MQ=255) gccgccCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCC > 1:118546‑M1/1‑60 (MQ=255) cgcCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGatat < 2:562825/150‑1 (MQ=255) aCTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCtcgtgcagttggcccagccccgacagttcccagggcttgggcaggttcacggccggt < 2:494302‑M1/97‑58 (MQ=255) aCTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCtcgtgcagttggcccagccccgacagttcccagggcttgggcaggttcacggccggt > 1:494302‑M1/1‑40 (MQ=255) cTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCtt < 1:203918/150‑1 (MQ=255) cgaAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGa < 2:570567/150‑1 (MQ=255) ggCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGcc < 2:405249/150‑1 (MQ=255) cAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTc > 1:117311/1‑150 (MQ=255) aaCCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCa > 1:541539/1‑150 (MQ=255) gCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATg > 2:66465/1‑117 (MQ=255) gCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATg < 1:66465/117‑1 (MQ=255) aCCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagt < 2:494302‑M2/97‑41 (MQ=255) aCCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagt > 1:494302‑M2/1‑57 (MQ=255) cGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGTCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCGAAGTGCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGc > 1:342507/1‑150 (MQ=255) gCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagtacgccacggcgcagggcggc < 2:363041‑M2/113‑61 (MQ=255) gCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagtacgccacggcgcagggcggc > 1:363041‑M2/1‑53 (MQ=255) ccGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTACATGTCGATCATCAGCCGTCAGGCACCGGGGAATGGcccc > 2:5398/1‑150 (MQ=255) | GACGAACTGGACGTGGCTGGCCAGTGGCGCACCTTCATACAGACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCC > NC_002947/4504055‑4504337 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |