| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4504189 | 29 (1.240) | 4 (0.180) | 4/244 | NT | 14.3% | coding (297/393 nt) | tusD | sulfur transfer protein complex subunit TusD |
| ? | NC_002947 | = 4504239 | 20 (0.890) | coding (347/393 nt) | tusD | sulfur transfer protein complex subunit TusD | |||||
ACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCCTCTGCCCGCGAGGCGCTGGACATCGCCCTGGCCGGCGGCGCGTTCGAC > NC_002947/4504097‑4504385 | aCCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGCCGAAGCCGAGGCAAAATTGTACGGACTGGCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCcgcg > 1:533413/1‑150 (MQ=255) aGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTgg < 1:529421/150‑1 (MQ=255) aGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTgg > 1:562825/1‑150 (MQ=255) gtggtgTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCtt < 1:531044/150‑1 (MQ=255) gtgtgtATCGCCGCCGCCCTGCGCCGTGGCGTACTCTACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTc < 1:189869/150‑1 (MQ=255) aTCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTc < 1:224627/150‑1 (MQ=255) cgcCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGatat < 2:562825/150‑1 (MQ=255) cTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCtt < 1:203918/150‑1 (MQ=255) cgaAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGa < 2:570567/150‑1 (MQ=255) ggCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGcc < 2:405249/150‑1 (MQ=255) cAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTc > 1:117311/1‑150 (MQ=255) aaCCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCa > 1:541539/1‑150 (MQ=255) gCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATg > 2:66465/1‑117 (MQ=255) gCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATg < 1:66465/117‑1 (MQ=255) aCCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagt > 1:494302‑M2/1‑57 (MQ=255) aCCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagt < 2:494302‑M2/97‑41 (MQ=255) cGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGTCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCGAAGTGCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGc > 1:342507/1‑150 (MQ=255) gCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagtacgccacggcgcagggcggc < 2:363041‑M2/113‑61 (MQ=255) gCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAggccggtcgctggtagcggttggcctcggcttcgtcgagtacgccacggcgcagggcggc > 1:363041‑M2/1‑53 (MQ=255) ccGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTACATGTCGATCATCAGCCGTCAGGCACCGGGGAATGGcccc > 2:5398/1‑150 (MQ=255) cccAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCCTCTGCCCGCGa < 1:587459/150‑1 (MQ=255) aaCTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCa < 2:246662/107‑1 (MQ=255) aaCTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCa > 1:246662/1‑107 (MQ=255) tGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCCTCTGCCCGCGAGGCGCTGGACATCGcc > 2:115643/1‑150 (MQ=255) gCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCCTCTGCCCGCGAGGCGCTGGACATCGCCCTGGCCggcggc < 2:533413/150‑1 (MQ=255) aCGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCCTCTGCCCGCGAGGCGCTGGACATCGCCCTGGCCGGCGGCGCGTTCGAc > 2:421939/1‑150 (MQ=255) | ACCCATCAGCTGGACGCCGTGGTGTGTATCGCCGCCGCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCGTGAACCTGCCCAAGCCCTGGGAACTGTCGGGGCTGGGCCAACTGCACGAGGCCGCGCAAGTGGCTGACCGCCTTGTCTGCTTCGGAGGCGACTGATATGGCCAAGTCCTTGTTGATCATCAGCCGTCAGGCACCGTGGAATGGCCCCTCTGCCCGCGAGGCGCTGGACATCGCCCTGGCCGGCGGCGCGTTCGAC > NC_002947/4504097‑4504385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |