New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5911055 =	23 (0.990)	4 (0.180)	4/246	NT	15.0%	coding (1159/1359 nt)	spuB	glutamylpolyamine synthetase
	?	NC_002947	5911078 =	23 (1.020)					coding (1136/1359 nt)	spuB	glutamylpolyamine synthetase

AGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGTAC  >  NC_002947/5910908‑5911202                                                                                                                                                    |                                                                                                                                                    aaaccgccccgtcggcgtgcgcgtaccggatgccggcccgcaaagccggcgcgtcgagaaccgcctgccgggcgccgacgccaacccgtacctggccatcgccgccagcctactgtgtggctacatcggcatggtcgaaggtatcgaGGc                                                                                                                                                   >  2:417514‑M1/148‑150 (MQ=255)            tCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTgg                                                                                                                                         >  2:292629/1‑149 (MQ=255)            tCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTgg                                                                                                                                         <  1:292629/149‑1 (MQ=255)            tCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGgc                                                                                                                                        <  2:29683/150‑1 (MQ=255)                      tGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCt                                                                                                                              <  1:90503/150‑1 (MQ=255)                                     cGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCa                                                                                                               >  2:379606/1‑150 (MQ=255)                                       gTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATg                                                                                                             >  2:13013/1‑150 (MQ=255)                                               tttCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTa                                                                                                     >  2:350626/1‑150 (MQ=255)                                                       ccAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCcacaca                                                                                             >  1:101901/1‑150 (MQ=255)                                                                 cACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGCCGCAGATTGCGCCGTTCGTAGCCACGGCCCTGCACTGGAGCGCTGCCCTCGATACCTGCGACCATGCCGATGAAGCGACAAAGTAGGCTggc                                                                                   >  2:107284/1‑150 (MQ=255)                                                                  aCCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTggcg                                                                                  >  1:76550/1‑150 (MQ=255)                                                                    cAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTggc                                                                                   <  1:130661/147‑1 (MQ=255)                                                                    cAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTggc                                                                                   >  2:130661/1‑147 (MQ=255)                                                                              acgccaacccgtacctggccatcgccgccagcctactgtgtggctacatcggcatggtcgaaggtatcgaGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTc                                                                                                                    <  1:570941‑M1/34‑1 (MQ=255)                                                                              acgccaacccgtacctggccatcgccgccagcctactgtgtggctacatcggcatggtcgaaggtatcgaGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTc                                                                                                                    >  2:570941‑M1/71‑104 (MQ=255)                                                                                gTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTa                                                                    <  1:379606/150‑1 (MQ=255)                                                                                           gTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGt                                                         >  2:400610/1‑150 (MQ=255)                                                                                                   tcgccgccagcctactgtgtggctacatcggcatggtcgaaggtatcgaGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGa                                                                                                                  >  1:145941‑M1/50‑85 (MQ=255)                                                                                                   tcgccgccagcctactgtgtggctacatcggcatggtcgaaggtatcgaGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGa                                                                                                                  <  2:145941‑M1/36‑1 (MQ=255)                                                                                                               gTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTtc                                     >  1:546639/1‑150 (MQ=255)                                                                                                                tCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTtct                                    >  2:77086/1‑150 (MQ=255)                                                                                                                  aGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCCGGCCGTtcgcc                                  >  2:284966/1‑147 (MQ=255)                                                                                                                    gggCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGCATGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGAc                                <  1:350626/150‑1 (MQ=255)                                                                                                                         ggCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGcc                           <  2:546639/150‑1 (MQ=255)                                                                                                                               ggTTGCGGCGTTCGTAGCCAATGTCGTTCACTGGCTCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCttt                     <  1:107284/150‑1 (MQ=37)                                                                                                                                 ttGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAg                                                                                                    <  1:431892/69‑1 (MQ=255)                                                                                                                                 ttGCGGCGTTCGTAGCAACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAg                                                                                                    >  2:431892/1‑69 (MQ=255)                                                                                                                                              aGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCg      <  1:13013/150‑1 (MQ=255)                                                                                                                                               gCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCgg     <  1:77086/150‑1 (MQ=255)                                                                                                                                                ccACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGt    >  2:268922/1‑150 (MQ=255)                                                                                                                                                  aCGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGTAc  >  1:297617/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                    AGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGCGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTGCGGGCCGGCATCCGGTAC  >  NC_002947/5910908‑5911202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.