New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 25940	9 (0.390)	4 (0.180)	4/240	NT	31.4%	coding (60/924 nt)	PP_0021	hypothetical protein
	?	NC_002947	= 25952	9 (0.410)					coding (72/924 nt)	PP_0021	hypothetical protein

AGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGCTGTATGAGCTACCGCCTAACGTGAAGAACCCATTCGGGAAA  >  NC_002947/25809‑26093                                                                                                                                                 |                                                                                                                                              aGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGaccttc                                                                                                                                         >  1:599443‑M2/1‑144 (MQ=255)  gTTAGGCCTACTGCTGTCTATCCTCTCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTTTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGaccttcc                                                                                                                                        >  1:353707‑M2/1‑143 (MQ=255)                tgcCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGTCGACCCAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGACACCTTCCGCAGAGATCCATgg                                                                                                                          <  2:20296/150‑1 (MQ=255)                               gTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTCTCG‑GCCTCGAAaccttccttgtcgatgatc                                                                                                                            >  1:358671‑M2/1‑114 (MQ=255)                               gTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTCTCG‑GCCTCGAAaccttccttgtcgatgatc                                                                                                                            <  2:358671‑M2/133‑20 (MQ=255)                                 tACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTCTCG‑GCCTCGAAaccttccttgtcgatgatcttgctttctgtgtcttcga                                                                                                         >  1:353527‑M2/1‑112 (MQ=255)                                      tCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGaa                                                                                                             >  1:555130/1‑141 (MQ=255)                                      tCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGaa                                                                                                             <  2:555130/141‑1 (MQ=255)                                                                                                      cacaGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGCTGTATGa                                    <  2:248718/150‑1 (MQ=255)                                                                                                       acaGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGc                                           >  1:294788/1‑142 (MQ=255)                                                                                                       acaGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGc                                           <  2:294788/142‑1 (MQ=255)                                                                                                                      atcGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGCTGTATGa                                    >  2:82483/1‑134 (MQ=255)                                                                                                                      atcGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGCTGTATGa                                    <  1:82483/134‑1 (MQ=255)                                                                                                                               gaaggTTTCGAGGC‑CGAGaccttccttgtcgatgatcttgctttctgtgtcttcgatgcggaccttatagacatccatctttgctgaaaccgtatcaatagagggtctctggatggtaacgagcgaggataggcagcagtaggcctaact           <  2:122952‑M2/150‑133 (MQ=255)                                                                                                                                        gAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGCTGTATGAGCTACCGCCTAACGTGAAGAACCCATTCGGGaaa  <  1:561216/150‑1 (MQ=255)                                                                                                                                               gagaCCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTgg                                                 <  2:237710/97‑1 (MQ=255)                                                                                                                                               gagaCCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTgg                                                 >  1:237710/1‑97 (MQ=255)                                                                                                                                                 |                                                                                                                                              AGTTAGGCCTACTGCTGCCTATCCTCGCTCGTTACCATCCAGAGACCCTCTATTGATACGGTTTCAGCAAAGATGGATGTCTATAAGGTCCGCATCGAAGACACAGAAAGCAAGATCATCGACAAGGAAGGTTTCGAGGC‑CGAGACCTTCCGCAGAGATCCATGGTACCAGCCTGGAAGTGCCGGCAAGCTAGCTCAGTTTGCTGTATGCCCGGCATGCGACAACCCTGTCCAGCTGGTTGGGCTGTATGAGCTACCGCCTAACGTGAAGAACCCATTCGGGAAA  >  NC_002947/25809‑26093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.