New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1322188	24 (1.030)	4 (0.170)	4/252	NT	13.6%	coding (549/2586 nt)	PP_1154	sensory box protein
	?	NC_002947	= 1322224	27 (1.170)					coding (513/2586 nt)	PP_1154	sensory box protein

GGTCAGGCCGGCGCCTTTGCCCAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGGTGTGTCTATATAGCTGTCAGCGCCTGCCTGGCTGGGCTGGCCTTTGAACAAG  >  NC_002947/1322083‑1322359                                                                                                                                              |                                                                                                                                        ggTCAGGCCGGCGCCTTTGCCCAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCAtt                                                                                                                                 <  2:107427/150‑1 (MQ=255)     aGGCCGGCGCCTTTGCCCAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAAc                                                                                                                             <  1:121246/150‑1 (MQ=255)                tttGCCCAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACg                                                                                                                  >  1:109903/1‑150 (MQ=255)                 ttGCCCAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATCGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACgg                                                                                                                 <  2:318889/150‑1 (MQ=255)                     ccAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATAGCATTACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGa                                                                                                             >  2:29363/1‑150 (MQ=255)                      cAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGAc                                                                                                            <  2:434816/150‑1 (MQ=255)                                      cTTTCGGTGAGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATc                                                                                            <  1:120244/150‑1 (MQ=255)                                               aGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCcgcg                                                                                   <  2:197567/150‑1 (MQ=255)                                                  gatcaaaTGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCgg                                                                                <  1:572212/145‑1 (MQ=255)                                                                   gACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGAcc                                                                                                           >  2:441232/1‑106 (MQ=255)                                                                   gACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGAcc                                                                                                           <  1:441232/106‑1 (MQ=255)                                                                     ccGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCt                                                             >  1:450936/1‑150 (MQ=255)                                                                          gcCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAgg                                                        <  2:109903/150‑1 (MQ=255)                                                                            cTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGa                                                                      <  1:347854/134‑1 (MQ=255)                                                                            cTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGa                                                                      >  2:347854/1‑134 (MQ=255)                                                                             tGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGgt                                                     <  2:450936/150‑1 (MQ=255)                                                                              gACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGgtg                                                    >  2:600409/1‑150 (MQ=255)                                                                                   aCCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCGGTTCTAGAGGCGGCTGCAGGGgtgtgtgt                                               >  1:395056/1‑148 (MQ=255)                                                                                     cTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGt                                                                                                  >  2:301304/1‑97 (MQ=255)                                                                                     cTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGt                                                                                                  <  1:301304/97‑1 (MQ=255)                                                                                     cTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAAGCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGGTGTGTCtat                                             >  2:411887/1‑150 (MQ=255)                                                                                              ggTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGGTGTGTCTATATAGCTGTc                                    >  1:356627/1‑150 (MQ=255)                                                                                                    cTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGGTGTGTCTATATAGCTGTCAGCgcc                              >  2:279493/1‑150 (MQ=255)                                                                                                     tCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCccgggaggttaccgacagcgaggtgagtcaggcgccggtcatgctattcattgaccagctcaccgaaa                                                                     <  2:418919‑M2/110‑69 (MQ=255)                                                                                                     tCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCccgggaggttaccgacagcgaggtgagtcaggcgccggtcatgctattcattgaccagctcaccgaaa                                                                     >  1:418919‑M2/1‑42 (MQ=255)                                                                                                          gTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCccgggaggttaccgacagcgaggtgagtcaggcgccggtcatgctattcattgaccagctcaccgaaagcaaactggcgcagttgggcaaag                                             >  2:286519‑M2/1‑37 (MQ=255)                                                                                                          gTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCccgggaggttaccgacagcgaggtgagtcaggcgccggtcatgctattcattgaccagctcaccgaaagcaaactggcgcagttgggcaaag                                             <  1:286519‑M2/129‑93 (MQ=255)                                                                                                                  gcACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTc                                                                        <  1:33218/94‑1 (MQ=255)                                                                                                                  gcACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTc                                                                        >  2:33218/1‑94 (MQ=255)                                                                                                                  gcACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGGTGTGTCTATATAGCTGTCAGCGCCTGCCTggctgggct                <  2:356627/150‑1 (MQ=255)                                                                                                                                cTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGGTGTGTCTATATAGCTGTCAGCGCCTGCCTGGCTGGGCTGGCCTTTGAACAAg  <  1:29363/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                        GGTCAGGCCGGCGCCTTTGCCCAACTGCGCCAGTTTGCTTTCGGTGAGCTGGTCAATGAATAGCATGACCGGCGCCTGACTCACCTCGCTGTCGGTAACCTCCCGGTCCGGGCGCACGGCTGCTGCACTGAGTGCGGCCGGCCAGCCATTGAACAGCACGAAACGGGTGACCTGCTCGCGTGAAATCGCCGCCGCGCGGGCCTGTTCGATAATCGGCTGCAGGGGTGTGTCTATATAGCTGTCAGCGCCTGCCTGGCTGGGCTGGCCTTTGAACAAG  >  NC_002947/1322083‑1322359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.