New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2050602 = | 2 (0.090) | 3 (0.180) | 3/180 | NT | 44.7% | intergenic (‑52/+123) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
? | NC_002947 | 2050712 = | 6 (0.360) | intergenic (‑162/+13) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
CGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAGGATGCTGGACAAC > NC_002947/2050608‑2050860 | CGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTgcg > 2:333272‑M1/1‑143 (MQ=255) CGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTgcg < 1:333272‑M1/143‑1 (MQ=255) CTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTaa < 2:10652‑M1/150‑1 (MQ=255) TTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCAt < 2:500279‑M1/110‑1 (MQ=255) TTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCAt > 1:500279‑M1/1‑110 (MQ=255) TTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCt < 2:347561‑M1/150‑1 (MQ=255) GGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTcccgcc < 2:605886‑M1/150‑1 (MQ=255) cccgctcctacaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggc > 2:54694‑M2/85‑150 (MQ=255) CCCGCTCCTACGGGGATGTAACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCGCCCGCGAAGAGGCCCGCACAGGTTACGCAAACCCCTCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTACGCTCCCGCCCgcggc > 2:330024‑M1/1‑150 (MQ=255) ccgctcctacaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCgcggcg > 1:168862‑M2/84‑150 (MQ=255) ggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATAc < 1:54694‑M2/78‑1 (MQ=255) ggATGTCACAGAGCCCGAAGACGGCGCGGCGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCACGCGGATAcc > 1:48818/1‑149 (MQ=255) cacaGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGcagat > 1:190769/1‑146 (MQ=255) gCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCACCCGCGGCGCAAGCGGATACGGCTGCGCCGCCa > 2:578757/1‑150 (MQ=255) cGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGaa > 1:209952/1‑150 (MQ=255) gAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGaaa > 1:82740/1‑150 (MQ=255) gACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCGAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAacgc > 2:13765/1‑150 (MQ=255) aggagcgggttcagccgcgaagggggcgggacaggTTACGCAAAACCATGAAGCGTGCTTCTTCATCAGGTGCGGCGACAGGCTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGGCAGAAACGCACGGCCAGCCAcagcag < 2:48818‑M2/115‑1 (MQ=255) gaagaggcccgcacaggTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGt > 2:237724‑M2/18‑150 (MQ=255) gaggcccgcacaggTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAg < 2:82740‑M2/136‑1 (MQ=255) ccgcacaggTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAg > 1:93349‑M2/10‑145 (MQ=255) ccgcacaggTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAg < 2:93349‑M2/136‑1 (MQ=255) gTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGACAAAGACGCACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAGGATGCTGGACAAc > 1:162498‑M2/2‑150 (MQ=255) | CGGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGCGGCGCAAGCGGATACGGCTGCGCCGCCAGAAACGCACGCCCAGCCACAGCAGCAACAAGCCAGCCACGGTGAGGATGCTGGACAAC > NC_002947/2050608‑2050860 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |