| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4328080 | 11 (0.430) | 4 (0.160) | 4/262 | 2.7 | 28.0% | coding (1004/1194 nt) | PP_3797 | membrane protein |
| ? | NC_002947 | = 4328111 | 10 (0.410) | coding (1035/1194 nt) | PP_3797 | membrane protein | |||||
CCGGGCTGGTACCCGTTGATGTTCCAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4327950‑4328080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacacCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTGCAGCGGGCGCATGGACTCGGTGACGAACTCCAGCGCCGAACGGTCGCTGATCAGGAACTGGCTGTCGACATTGCGTGTGTACGGATTCACCGAAGCACTCTGGAACATCAA < NC_002947/4328111‑4327965 CCGGGCTGGTACCCGTTGATGTTCCAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGC < 1:109951/127‑1CCGGGCTGGTACCCGTTGATGTTCCAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGC > 2:109951/1‑127 TGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTGCAGCGG < 1:337980/100‑1 TGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTGCAGCGG > 2:337980/1‑100 TCACCGAGTCCATGCGCCCGCTGCACACCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTG > 1:616517/1‑64 TCACCGAGTCCATGCGCCCGCTGCACACCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTG < 2:616517/64‑1 CACCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTGCAGCGGGCGCATGGACTCGGTGACGAACTCCAGCGCCGAACGGTCGCTGATCAGGAACTGGCTGTCGACATTGCGTGTGTACGGATTCACCGAAGCACTCTGGAACATCAA < 1:347587/150‑1 ACCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTGCAGCGGGCGCATGGACTCGGTGACGAACTCCAGCGCCGAACGGTCGCTGATCAGGAACTGGCTGTCGACATTGCGTGTGTACGGATTCACCGAA > 1:566751/1‑132 ACCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTGCAGCGGGCGCATGGACTCGGTGACGAACTCCAGCGCCGAACGGTCGCTGATCAGGAACTGGCTGTCGACATTGCGTGTGTACGGATTCACCGAA < 2:566751/132‑1 CCGGGCTGGTACCCGTTGATGTTCCAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4327950‑4328080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacacCAGCTTGATCGGCAAACCGCCAAAGTCGCCAGTGTGCAGCGGGCGCATGGACTCGGTGACGAACTCCAGCGCCGAACGGTCGCTGATCAGGAACTGGCTGTCGACATTGCGTGTGTACGGATTCACCGAAGCACTCTGGAACATCAA < NC_002947/4328111‑4327965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |