New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4328080	11 (0.430)	4 (0.160)	4/262	2.7	28.0%	coding (1004/1194 nt)	PP_3797	membrane protein
	?	NC_002947	= 4328111	10 (0.410)					coding (1035/1194 nt)	PP_3797	membrane protein

TTGATGTTCCAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATCTGGACCAAACGCACCGCCCAGGCCACCGCCGCGGCCCTCAAGCGCAGCGAGCGCGCTCCACGTGCGGCACACAGTGAAACCAC  >  NC_002947/4327965‑4328251                                                                                                                                                   |                                                                                                                                             ttGATGTTCCAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGgtg                                                                                                                                           <  1:347587‑M2/150‑4 (MQ=255)          cAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGttcttc                                                                                                                                  <  1:59566/150‑1 (MQ=255)                  ttCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGgt                                                                                                                                            <  2:566751‑M2/132‑3 (MQ=255)                  ttCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGgt                                                                                                                                            >  1:566751‑M2/1‑130 (MQ=255)                    cGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCCAAGCTCGCAGGGCTCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGa                                                                                                                        <  2:173554/150‑1 (MQ=255)                                                   ccAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGTGCCCGCTGCACACTGGCGACTTTTGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCctgct                                                                                         <  1:41667/150‑1 (MQ=255)                                                       ttCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATc                                                                                     >  2:201252/1‑150 (MQ=255)                                                                   gACCGGTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCTCACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGAGCTGGACCAAACGc                                                                         <  2:191029/150‑1 (MQ=255)                                                                    aCCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATCTGGACCAAACGCa                                                                        >  1:221371/1‑150 (MQ=255)                                                                            gcgcTGGAGTTCGTCACCTAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATCTGGACCAAACGCACCGCCCAg                                                                <  2:347587/150‑1 (MQ=255)                                                                                                          ccGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGgtgtgcagcgggcgcatggactcggtgacgaactccagcgccgaacggtcgctgatca                                                                                    <  1:337980‑M2/100‑59 (MQ=255)                                                                                                          ccGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGgtgtgcagcgggcgcatggactcggtgacgaactccagcgccgaacggtcgctgatca                                                                                    >  2:337980‑M2/1‑42 (MQ=255)                                                                                                                cacaCTGGCGACTTTGGCGGTTTGCCGATCAAGCTGgtgtgcagcgggcgcatggactcggtga                                                                                                                  >  1:616517‑M2/1‑36 (MQ=255)                                                                                                                cacaCTGGCGACTTTGGCGGTTTGCCGATCAAGCTGgtgtgcagcgggcgcatggactcggtga                                                                                                                  <  2:616517‑M2/64‑29 (MQ=255)                                                                                                                                       gCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATCTGGACCAAACGCACCGCCCAGGCCACCGCCGCGGCCCTCAAGCGCAGCGAGCGCGCTCCACGTGCGGCACACAGTGAAac     >  1:473371/1‑150 (MQ=255)                                                                                                                                          gATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATCTGGACCAAACGCACCGCCCAGGCCACCGCCGCGGCCCTCAAGCGCAGCGAGCGCGCTCCACGTGCGGCACACAGTGAAaccac  >  2:310437/1‑150 (MQ=255)                                                                                                                                          gATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATCTGGACCAAACGCACCGCCCAGGCCACCGCCGCGGCCCTCAAGCGCAGCGAGCGCGCTCCACGTGCGGCACACAGTGAAaccac  <  2:221371/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                             TTGATGTTCCAGAGTGCTTCGGTGAATCCGTACACACGCAATGTCGACAGCCAGTTCCTGATCAGCGACCGTTCGGCGCTGGAGTTCGTCACCGAGTCCATGCGCCCGCTGCACACTGGCGACTTTGGCGGTTTGCCGATCAAGCTGGTGTGGTTCTTCTTCGGCCTGATCCTGACCCTGATGGTGCTCAGCGGCCTGCTGATCTGGACCAAACGCACCGCCCAGGCCACCGCCGCGGCCCTCAAGCGCAGCGAGCGCGCTCCACGTGCGGCACACAGTGAAACCAC  >  NC_002947/4327965‑4328251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.