| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5628645 = | 40 (1.580) | 7 (0.300) | 7/254 | 1.8 | 17.2% | intergenic (‑64/+43) | rlmJ/putP | 23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter |
| ? | NC_002947 | 5628678 = | 30 (1.270) | intergenic (‑97/+10) | rlmJ/putP | 23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACGTCGGCGTGGTTGCCGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAACAGGAAGCCCGGGATGATTTCGTACAACCCGAGG > NC_002947/5628537‑5628826 | gACGTCGGCGTGGTTGCCGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGgt < 2:235168/150‑1 (MQ=255)gACGTCGGCGTGGTTGCCGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGgt > 1:223031/1‑150 (MQ=255) tCGGCGTGGTTGCCGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTa < 2:279972/150‑1 (MQ=255) gCGTGGTTGCCGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACtt < 1:193805/150‑1 (MQ=255) ggTTGCCGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCg > 2:354786/1‑150 (MQ=255) gatctgcaagctgggcagcccttcgcagacgatggtcaagcgcttcgaagcggctgatgcggcgtatcacgccgacaagtaacacccgttgaattggcggcacccgcaaagcaggcgccgccaatTCAACGGGTGTTACTTGTCGGCGTg < 1:102329‑M2/25‑1 (MQ=255) cGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGa > 1:551805/1‑150 (MQ=255) caagctgggcagcccttcgcagacgatggtcaagcgcttcgaagcggctgatgcggcgtatcacgccgacaagtaacacccgttgaattggcggcacccgcaaagcagacgccgccgatTCAACTGGTGTTACTTGTCGgggtgacggtt > 2:102329‑M2/120‑145 (MQ=255) gAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATAcgccg < 1:360470/150‑1 (MQ=255) aGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCa > 1:584909/1‑150 (MQ=255) gATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCt > 2:544152/1‑150 (MQ=255) ttCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGaa < 2:261599/150‑1 (MQ=255) ttCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGaa > 1:482552/1‑150 (MQ=255) ttCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGaa < 1:544152/150‑1 (MQ=255) tGGCAACTCCTGCGAGGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCGGGCTGCTGATTGGCGGCACCCGCAAAGCAGGTGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAgcgc < 1:549387/150‑1 (MQ=255) tggtcaagcgcttcgaagcggctgatgcggcgtatcacgccgacaagtaacacccgttggattggcggcacccgcaaagcaggcgccgccaatTCaa > 1:469833‑M2/94‑97 (MQ=255) tggtcaagcgcttcgaagcggctgatgcggcgtatcacgccgacaagtaacacccgttggattggcggcacccgcaaagcaggcgccgccaatTCaa < 2:469833‑M2/4‑1 (MQ=255) aaCTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGt < 2:192407/117‑1 (MQ=255) aaCTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGt > 1:192407/1‑117 (MQ=255) cTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTa > 1:144466/1‑104 (MQ=255) cTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTa < 2:144466/104‑1 (MQ=255) ccTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCAt > 2:50740/1‑150 (MQ=255) gAAGGCGGCAAGTTTACCTTGCCTTGTAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCt < 2:135383/150‑1 (MQ=255) aaGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTg < 1:50433/150‑1 (MQ=255) aaGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGc > 2:125856/1‑150 (MQ=255) aaccgtcaccccgacaagtaacaccagttgaATCGGCGGCGTCTGCTTTGCGGGTGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTg > 2:102329‑M1/32‑150 (MQ=255) cttgcAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCt > 1:17577/1‑150 (MQ=255) cacgccgacaagtaacacccgttgaATTGGCGGCGCCTGCTTTGCGGGTGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAgcttgcagatc < 1:102329‑M1/125‑6 (MQ=255) gTCAGGCCTGGCTGCTGATTGGCGGCACCCGCACAGCGGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAAt > 1:303072/1‑150 (MQ=255) gTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACgg < 2:616440/57‑1 (MQ=255) gTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACgg > 1:616440/1‑57 (MQ=255) gTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAAt > 1:7998/1‑150 (MQ=255) cAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATgg < 2:482552/150‑1 (MQ=255) gCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCAAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCACCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGa < 2:40644/150‑1 (MQ=255) ttgaATTGGCGGCGCCTGCTTTGCGGGTGCCGCCAATCCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCa < 2:469833‑M1/93‑1 (MQ=255) ttgaATTGGCGGCGCCTGCTTTGCGGGTGCCGCCAATCCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCa > 1:469833‑M1/5‑97 (MQ=255) gATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAAc < 1:50740/150‑1 (MQ=255) attggcggcgcctgctttgcgggtgccgccaatTCAACGGGTGTTACTTGTCGGCGt > 1:596925‑M2/34‑57 (MQ=255) attggcggcgcctgctttgcgggtgccgccaatTCAACGGGTGTTACTTGTCGGCGt < 2:596925‑M2/24‑1 (MQ=255) gcggcgcctgctttgcgggtgccgccaatTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAACAGGaa > 1:620323‑M2/30‑150 (MQ=255) cGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAACAGGAAGCCCGGga > 2:526017/1‑150 (MQ=255) ccgccaatTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAACAGGAAGCCCGGGATGATTTCGTACaa < 2:223031‑M2/142‑1 (MQ=255) aatTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAACAGGAAGCCCGGGATGATTTCGTACAACCCGa < 2:584909‑M2/147‑1 (MQ=255) tTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAACAGGAAGCCCGGGATGATTTCGTACAACCCGAgg < 1:354786‑M2/149‑1 (MQ=255) | GACGTCGGCGTGGTTGCCGGCGTGGAAGGCGTGACGATAGTTCATGGCAACTCCTGCGAAGGCGGCAAGTTTACCTTGCCTTGCAGGCGGAGTCAGGCCTGGCTGCTGATTGGCGGCACCCGCAAAGCAGGCGCCGCCAATTCAACGGGTGTTACTTGTCGGCGTGATACGCCGCATCAGCCGCTTCGAAGCGCTTGACCATCGTCTGCGAAGGGCTGCCCAGCTTGCTCACCAGAACAATGGCGATGCTGGCGAACAGGAAGCCCGGGATGATTTCGTACAACCCGAGG > NC_002947/5628537‑5628826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |