New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 156028 = | 115 (1.230) | 6 (0.070) | 6/242 | NT | 5.1% | coding (348/798 nt) | ygdQ | transport protein |
? | NC_002947 | 156056 = | 110 (1.220) | coding (320/798 nt) | ygdQ | transport protein |
ACCCGTATCATGCTGCTGCTGTCGATTACCTGGGTCATGCGCCTCACCGCCGACCTGTTCGTGGTCTTTGGCCAAGGCATCTCCGGGCGTGACCTGATCCTGTTCTTCGGTGGCCTGTTCCTGCTGTGGAAGAGCTCGCAAGAGATCTACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/156180‑156028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGGGCCAGGCCGA > NC_002947/156056‑156203 ACCCGTATCATGCTGCTGCTGTCGATTACCTGGGTCATGCGCCTCACCGCCGACCTGTTCGTGGTCTTTGGCCAAGGCATCTCCGGGCGTGACCTGATCCTGTTCTTCGGTGGCCTGTTCCTGCTGTGGAAGAGCTCGCAAGAGATCTAC < 1:2065395/150‑1 CCGTATCATGCTGCTGCTGTCGATTACCTGGGTCATGCGCCTCACCGCCGACCTGTTCGTGGTCTTTGGCCAAGGCATCTCCGGGCGTGACCTGATCCTGTTCTTCGGTGGCCTGTTCCTGCTGTGGAAGAGCTCGCAAGAGATCTACCA > 2:1861003/1‑150 TGCTGCTGTCGATTACCTGGGTCATGCGCCTCACCGCCGACCTGTTCGTGGTCTTTGGCCAAGGCATCTCCGGGCGTGACCTGATCCTGTTCTTCGGTGGCCTGTTCCTGCTGTGGTAGATCTCTTGCGAGCTCTTCCACAG‑CAGGAACA < 2:1339135/150‑1 CTGTTCCTGCTGTGGAAGAGCTCGCAAGAGATCTACCACGGTCTGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAG > 1:762715/1‑150 GCTGTGGAAGAGCTCGCAAGAGATCTACCACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGAT > 2:890390/1‑150 GAAGAGCTCGCAAGAGATCTACCACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTAGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGT > 1:97232/1‑150 AAGAGCTCGCAAGAGATCTACCACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAA < 1:1854785/92‑1 AAGAGCTCGCAAGAGATCTACCACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAA > 2:1854785/1‑92 ACAG‑CAGGCACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGGTGCCTTGGCCAAAGACCACGAACAGGACGGCGGTGAGGCGCATGACCCAGATAATCGACAGCAGCAGCATGATACGGGTGACCATCGGCAGGGGCAGGCCGA > 2:729647/1‑150 ACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGGGCCAGGCCGA > 1:972317/1‑150 ACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGGGCCAGGCCGA > 2:1347596/1‑150 ACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGGGCCAGGC < 1:1366768/147‑1 ACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGGGCCAGGC > 2:1366768/1‑147 ACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGG > 1:1183908/1‑140 ACAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGG < 2:1183908/140‑1 ACCCGTATCATGCTGCTGCTGTCGATTACCTGGGTCATGCGCCTCACCGCCGACCTGTTCGTGGTCTTTGGCCAAGGCATCTCCGGGCGTGACCTGATCCTGTTCTTCGGTGGCCTGTTCCTGCTGTGGAAGAGCTCGCAAGAGATCTACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/156180‑156028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacAG‑CAGGAACAGGCCACCGAAGAACAGGATCAGGTCACGCCCGGAGATGCCTTGGCCAAAGACCACGAACAGGTCGGCGGTGAGGCGCATGACCCAGGTAATCGACAGCAGCAGCATGATACGGGTGACCATGGCCAGGGCCAGGCCGA > NC_002947/156056‑156203 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |