| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 436361 | 76 (0.810) | 6 (0.070) | 6/232 | NT | 8.0% | intergenic (+191/+42) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein |
| ? | NC_002947 | = 436376 | 68 (0.790) | intergenic (+206/+27) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein | |||||
CACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/436204‑436361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctctgcaggTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGCTTTGTGCACAAGCTGCTGATAATTGGGCATTTTTTGAGCAAAACCGTACAAGGCACGTGATACCTGGGCTGGAGAGGTACACCCCCAG < NC_002947/436376‑436228 CACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTC < 2:1363537/150‑1 aagcGGAAGGGCCTATGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCT > 2:2368233/5‑150 GGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCT > 1:888571/1‑150 GAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTAAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATATCTCTGCA > 2:131038/1‑150 AGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGG < 1:936021/150‑1 CCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGC > 1:206435/1‑96 CCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGC < 2:206435/96‑1 AAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAG > 1:483119/1‑105 AAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAG < 2:483119/105‑1 CCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGTCATGTAGCGCCTGGCCTGCAGA < 1:534025/95‑1 CCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGGTCATGTAGCGCCTGGCCTGCAGA > 2:534025/1‑95 GATAACCTATGGAGATGTCTCTGCAGGTCATGTAGCGCCTGGCCTGCA > 1:208176/1‑48 GATAACCTATGGAGATGTCTCTGCAGGTCATGTAGCGCCTGGCCTGCA < 2:208176/48‑1 TGCAGGTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGCTTTGTGCACAAGCTGCTGATAATTGGGCATTTTTTGAGCAAAACCGTACAAGGCACGTGATACCTGGGCTGGAGAGGTACACC < 1:2235581/150‑1 GCAGGTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGC < 2:1493096/66‑1 GCAGGTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGC > 1:1493096/1‑66 GGTCCTGTAGCGCCTGGCCTGCATAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGCTTTGTGCACAAGCTGCTGATAATTGGGCATTTTTTGAGTAAAACCGTACAAGGCACGGGATACCTGGGCTGGAGAGGTACACCCCCA < 2:168536/150‑1 GGTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGCTTTGTGCACAAGCTGCTGATAATTGGGCATTTTTTGAG > 1:2294060/1‑101 GGTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGCTTTGTGCACAAGCTGCTGATAATTGGGCATTTTTTGAG < 2:2294060/101‑1 GTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGCTTTGTGCACAAGCTGCTGATAATTGGGCATTTTTTGAGCAAAACCGTACAAGGCACGTGATACCTGGGCTGGAGAGGTACACCCCCAG < 2:1998759/150‑1 CACGGGGAAGGCCCTGTGGATAACCTGGGGGTGTACCTCTCCAGCCCAGGTATCACGTGCCTTGTACGGTTTTGCTCAAAAAATGCCCAATTATCAGCAGCTTGTGCACAAAGCGCGGGGACGAGGGTGTGGATAACCTATGGAGATGTCTCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/436204‑436361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctctgcaggTCATGTAGCGCCTGGCCTGCAGAGACATCTCCATAGGTTATCCACACCCTCGTCCCCGCGCTTTGTGCACAAGCTGCTGATAATTGGGCATTTTTTGAGCAAAACCGTACAAGGCACGTGATACCTGGGCTGGAGAGGTACACCCCCAG < NC_002947/436376‑436228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |