| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1593399 = | 111 (1.190) | 8 (0.120) +GTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTT |
10/174 | NT | 11.9% | intergenic (‑79/+41) | PP_1398/PP_1399 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1593500 = | 59 (0.630) | coding (345/405 nt) | PP_1399 | hypothetical protein | |||||
ACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCAACGCGCACCGCATCAGCTGATACCTGATTGCGAGCACCCAGCCCGGCTTCGGCCGGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1593546‑1593399‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCGGCGAAGCGCT > NC_002947/1593500‑1593648 |||||||||||||||||||||||||||||||||||||| ACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCAACGCGCACCGCATCAGCTGATACCTGATTGCGAGCACCCAGCCCGGCTTCGGCCGGGCTTGGT < 1:519273/150‑1 TTCGACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCAACGCGCACCGCATCAGCTGATACCTGATTGCGAGCACCAAGCCCGGCCGAAGCCGGGCTGGGTGCTC < 2:1957809/119‑1 TTCGACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCAACGCGCACCGCATCAGCTGATACCTGATTGCGAGCACCAAGCCCGGCCGAAGCCGGGCTGGGTGCTC > 1:1957809/1‑119 CGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCAACGCGCACCGCATCAGCTGATACCTGATTGCGAGCACCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCA > 1:650273/1‑115 CGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCAACGCGCACCGCATCAGCTGATACCTGATTGCGAGCACCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCA < 2:650273/115‑1 CACCCAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGC < 1:1015159/128‑1 CACCCAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGC > 2:1015159/1‑128 ACCCAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGT > 1:1157451/1‑150 CCAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCG > 1:504987/1‑150 CCAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCG > 1:507713/1‑150 CCAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAG > 1:1408963/1‑85 CCAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAG < 2:1408963/85‑1 CAGCCCGGCTTCGGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGA > 1:1522153/1‑150 GGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCATTTGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTG < 1:2018203/150‑1 ggGCTCGCAATCAGGTATCAGCGGATGCGGCGCGCGTGGGTGCGGTCGAAGCCGTCTCCAGCGAAGCGTTGGGCCCCGGTGCGGTCGAAGCCGTCTTCACCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGAGTTGG < 2:97595/148‑1 TGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGC < 1:207908/150‑1 GCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAA > 2:568940/1‑102 GCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAA < 1:568940/102‑1 CTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCA > 1:2444174/1‑150 TCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGC > 1:1426872/1‑141 TCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGC < 2:1426872/141‑1 TCGCAATCAGGTATCAGCTGATGCGGTGCGAGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGGCAC > 2:1404481/1‑150 GCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGGCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCG > 1:1142390/1‑150 GCAATCAGGTATCAGCGGATGCGGTGCGGGTGGGTGCGGGCGAAGCCGTCTTCAGCGAAGCGTTGGCCGCCGGTGCGGTCGCAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCG < 2:1373998/150‑1 ATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTG < 2:1895332/150‑1 AGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGG > 2:1421269/1‑150 AGGTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGG > 2:1473436/1‑150 GTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCGACCGGTGCGGCCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGTGGTC > 1:1755104/1‑150 GTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTG > 2:2146699/1‑135 GTATCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTG < 1:2146699/135‑1 TCAGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCCGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGCCTTCAGCGAAGCACTGGCCAACCGTGCGGACGAc > 2:1076800/1‑149 AGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTG > 1:733108/1‑91 AGCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTG < 2:733108/91‑1 gcgGATGCGGGGCGTGTGGGTGCGGGCGAAGGCGTCTTCAGCGAAGCGGTGGCCGCCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCC < 2:2298386/147‑1 GCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCC < 2:1522153/150‑1 GCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGT > 1:911167/1‑60 GCTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGT < 2:911167/60‑1 CTGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGAGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCG > 1:132504/1‑150 TGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGC < 1:2402043/118‑1 TGATGCGGTGCGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGC > 2:2402043/1‑118 CGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAA > 2:882729/1‑96 CGCGTTGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAA < 1:882729/96‑1 TGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCGGCGAAGCGCT < 2:1157451/150‑1 |||||||||||||||||||||||||||||||||||||| ACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCGGTGGCCAACGCTTCGCTGAAGACGGCTTCGACCGCACCAACGCGCACCGCATCAGCTGATACCTGATTGCGAGCACCCAGCCCGGCTTCGGCCGGGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1593546‑1593399‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCGGCGAAGCGCT > NC_002947/1593500‑1593648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |