BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1593399 =	111 (1.190)	8 (0.120) +GTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTT	10/174	NT	11.9%	intergenic (‑79/+41)	PP_1398/PP_1399	hypothetical protein/hypothetical protein
*	?	NC_002947	1593500 =	59 (0.630)	8 (0.120) +GTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTT	10/174	NT	11.9%	coding (345/405 nt)	PP_1399	hypothetical protein

Only 100 of 132 total aligned reads displayed.

CGGGGACCGACGATGGCATTGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGT  >  NC_002947/1593250‑1593546

caacgcttcgctgaagacggcttcgaccgcacaaatggccaacgcttcgctgaagacggcttcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacc                                                                                                                                                       <  1:2018203‑M1/1‑1 (MQ=255)

 ggggACCGACGATGGCATTGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAATCCTGAGCTCGCCTGCAAATGATCa                                                                                                                                                      <  2:833848/150‑1 (MQ=255)

 ggggACCGACGATGGCATTGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCa                                                                                                                                                      >  1:2256344/1‑150 (MQ=255)

  gggACCGACGATGGCATTGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCaa                                                                                                                                                     <  2:1493310/150‑1 (MQ=255)

  gggACCGACGATGGCATTGAACAGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCGGCAAATGATCaa                                                                                                                                                     <  2:1144194/150‑1 (MQ=255)

       cgacgaTGGCATTGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCg                                                                                                                                                >  2:2083505/1‑150 (MQ=255)

       cgacgaTGGCATTGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCg                                                                                                                                                >  1:1522406/1‑150 (MQ=255)

                  ttGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCgg                                                                                                                                     <  1:2083505/150‑1 (MQ=255)

                     aaCGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTAGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCt                                                                                                                                  >  1:11045/1‑150 (MQ=255)

                      tcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTg                                                                                                                                 >  1:1522153‑M1/128‑150 (MQ=255)

                       cgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                >  1:507713‑M1/127‑150 (MQ=255)

                       cgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                >  1:504987‑M1/127‑150 (MQ=255)

                       cGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  2:638789/150‑1 (MQ=255)

                       cGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  2:345026/150‑1 (MQ=255)

                       cGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  1:751646/150‑1 (MQ=255)

                        gggTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTggg                                                                                                                               >  1:1068359/1‑150 (MQ=255)

                        gggTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  1:2225834/149‑1 (MQ=255)

                         accgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTGGGt                                                                                                                              >  1:1157451‑M1/125‑150 (MQ=255)

                          gTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  2:2089102/147‑1 (MQ=255)

                          gTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                >  1:2089102/1‑147 (MQ=255)

                           tCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGc                                                                                                                            >  2:290091/1‑150 (MQ=255)

                             ttGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTc                                                                                                                          <  2:2345407/149‑1 (MQ=255)

                             gTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTc                                                                                                                          >  2:441088/1‑150 (MQ=255)

                                    aGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCATGTTTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCa                                                                                                                   <  2:2158506/150‑1 (MQ=255)

                                    aGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCa                                                                                                                   <  2:874131/150‑1 (MQ=255)

                                    aGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCa                                                                                                                   <  1:441088/150‑1 (MQ=255)

                                     ggCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAg                                                                                                                  <  2:2179909/150‑1 (MQ=255)

                                     ggCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAg                                                                                                                  <  2:1778259/150‑1 (MQ=255)

                                       ccGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGt                                                                                                                >  1:726646/1‑150 (MQ=255)

                                         gTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTAt                                                                                                              <  2:1873652/150‑1 (MQ=255)

                                             ccTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGc                                                                                                          <  1:1083040/150‑1 (MQ=255)

                                                gctgaagacggcttcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTGGGTg                                                                                                                             >  2:1015159‑M1/102‑128 (MQ=255)

                                                gctgaagacggcttcgaccgcaccggtggccaacgcttcgctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTGGGTg                                                                                                                             <  1:1015159‑M1/27‑1 (MQ=255)

                                                      ggTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCCATCGCTTATCAGCTGATGCGGt                                                                                                 <  1:2019371/150‑1 (MQ=255)

                                                      ggTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCggg                                                                                                 >  1:2298386/1‑149 (MQ=255)

                                                          cGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTgcgc                                                                                             <  1:1404100/150‑1 (MQ=255)

                                                           gtagtaATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGcgcg                                                                                            >  1:1801991/1‑150 (MQ=255)

                                                            tagtaATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTg                                                                                                                                 >  1:657174/1‑112 (MQ=255)

                                                            tagtaATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTg                                                                                                                                 <  2:657174/112‑1 (MQ=255)

                                                            tagtaATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGt                                                                                           >  2:2146506/1‑150 (MQ=255)

                                                               taATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCgg                                                                                                                                     <  1:305854/105‑1 (MQ=255)

                                                               taATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCgg                                                                                                                                     >  2:305854/1‑105 (MQ=255)

                                                                aaTACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGt                                                                                       <  1:1679942/150‑1 (MQ=255)

                                                                     aTCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTc                                                                                                                          >  2:635449/1‑110 (MQ=255)

                                                                     aTCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTc                                                                                                                          <  1:635449/110‑1 (MQ=255)

                                                                     aTCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGt                                                                                <  2:1801991/150‑1 (MQ=255)

                                                                     aTCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGt                                                                                >  2:1736096/1‑150 (MQ=255)

                                                                        tgtgCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGa                                                                             >  1:2313618/1‑150 (MQ=255)

                                                                          tgCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTgcg                                                                                              <  2:2307055/133‑1 (MQ=255)

                                                                             tGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCg                                                                        >  1:1373998/1‑150 (MQ=255)

                                                                               ggCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTc                                                                      >  2:207908/1‑150 (MQ=255)

                                                                                gCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCt                                                                     >  2:574729/1‑150 (MQ=255)

                                                                                gCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCt                                                                     >  2:1333524/1‑150 (MQ=255)

                                                                                   tgttgGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCa                                                                  <  1:395120/150‑1 (MQ=255)

                                                                                     ttgGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCgg                                                                                                                                     >  2:1610578/1‑83 (MQ=255)

                                                                                     ttgGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTa                                                                                                               >  1:447272/1‑105 (MQ=255)

                                                                                     ttgGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTa                                                                                                               <  2:447272/105‑1 (MQ=255)

                                                                                     ttgGCCCTACCTCCTGATGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGc                                                                >  2:1223743/1‑150 (MQ=255)

                                                                                       ggCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGa                                                              <  2:11045/150‑1 (MQ=255)

                                                                                        ctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                >  1:1408963‑M1/62‑85 (MQ=255)

                                                                                        ctgaagacggcttcgaccgcaccaacgcgcaccgcatcagctgatacctgattgcgagcacCCAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  2:1408963‑M1/24‑1 (MQ=255)

                                                                                              cctcctGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTg                                                       <  1:831704/150‑1 (MQ=255)

                                                                                                   tggtggACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                >  1:737674/1‑74 (MQ=255)

                                                                                                   tggtggACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  2:737674/74‑1 (MQ=255)

                                                                                                   tggtggACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTgg                                                      <  2:504018/146‑1 (MQ=255)

                                                                                                   tggtggACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCAc                                                  <  1:1302132/150‑1 (MQ=255)

                                                                                                        gACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                >  2:1143497/1‑69 (MQ=255)

                                                                                                        gACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTgg                                                                                                                                <  1:1143497/69‑1 (MQ=255)

                                                                                                        gACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGt                                                                                           >  2:1343243/1‑106 (MQ=255)

                                                                                                          cAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTAACAACCGGCTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCg                                           >  1:1483793/1‑150 (MQ=38)

                                                                                                            aGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGt                                         <  2:2313618/150‑1 (MQ=255)

                                                                                                            aGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGt                                         <  1:574729/150‑1 (MQ=255)

                                                                                                                gCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGaa                                     >  1:1143876/1‑150 (MQ=255)

                                                                                                                 ccTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAg                                    >  1:153935/1‑150 (MQ=255)

                                                                                                                 ccTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAg                                    >  2:788409/1‑150 (MQ=255)

                                                                                                                 ccTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAg                                    >  2:792937/1‑150 (MQ=255)

                                                                                                                      tgtgCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTc                               >  1:213675/1‑150 (MQ=255)

                                                                                                                        tgCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCtt                             <  1:1736096/150‑1 (MQ=255)

                                                                                                                          ccAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCa                           >  1:421190/1‑150 (MQ=255)

                                                                                                                          ccAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCa                           <  1:566963/150‑1 (MQ=255)

                                                                                                                          ccAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCAACCGGTGCGGTCGAAGCCGTCTTCa                           >  1:161463/1‑150 (MQ=255)

                                                                                                                            aaGCCTGAGCTCGCCTGCAAATGCTCAAGCCCTGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CAGTCGATTCCCTGTATAGTAGAGCGTTGTGCTCCGGTGCGGTCGAAGCCGTCTTCAGc                         <  1:894506/150‑1 (MQ=255)

                                                                                                                            aaGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAg                                                                                                                  <  2:86931/63‑1 (MQ=255)

                                                                                                                            aaGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAg                                                                                                                  >  1:86931/1‑63 (MQ=255)

                                                                                                                             aGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCg                        <  2:793222/150‑1 (MQ=255)

                                                                                                                              gCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAg                                    >  2:1691477/1‑137 (MQ=255)

                                                                                                                               ccTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGaa                      <  2:726646/150‑1 (MQ=255)

                                                                                                                                cTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAg                     >  1:1936644/1‑150 (MQ=255)

                                                                                                                                 tGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGc                    >  1:1887257/1‑150 (MQ=255)

                                                                                                                                   aGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGt                  <  2:1887257/150‑1 (MQ=255)

                                                                                                                                     cTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTg                <  2:213675/150‑1 (MQ=255)

                                                                                                                                      tCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCg                                                >  1:1492787/1‑117 (MQ=255)

                                                                                                                                      tCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGGTGTTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTgg               >  1:161383/1‑150 (MQ=255)

                                                                                                                                          cTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑Cgg                                                                                 <  1:1140332/80‑1 (MQ=255)

                                                                                                                                           tGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTGAACCG‑CGTGGGGGTC‑GCAGCGAATCGTTGGCCACCGGTGCGGCTGAAGCCCGCTTCAGCGAAGCGTTGGCCAcc          >  1:1224433/1‑150 (MQ=21)

                                                                                                                                            gCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTGGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCg         >  1:143599/1‑150 (MQ=255)

                                                                                                                                               gagcacCCAGCCCGGCTTCGGCCGGGCTTGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGaa                                     >  1:1957809‑M1/7‑119 (MQ=255)

                                                                                                                                                aTGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGc     <  2:1936644/150‑1 (MQ=255)

                                                                                                                                                  gATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCgg   >  2:1113197/1‑150 (MQ=255)

                                                                                                                                                   acCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGt  <  1:519273‑M1/148‑1 (MQ=255)

CGGGGACCGACGATGGCATTGAACGGGTCGTGCGGCAGGCCGTGGCCTTTGGCGGGTTCGTAGTAATACATCTGTGCTGGGCTTGTTGGCCCTACCTCCTGGTGGACAAGGTGCCTAGTGTGCCAAGCCTGAGCTCGCCTGCAAATGATCAAGCCCGGCCGAAGCCGGGCTGGGTGCTCGCAATCAGGTATCAGCTGATGCGGTGCGCGTTGGTG‑‑CGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGTCGAAGCCGTCTTCAGCGAAGCGTTGGCCACCGGTGCGGT  >  NC_002947/1593250‑1593546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.