New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1613744 = | 73 (0.780) | 4 (0.050) | 4/236 | NT | 5.1% | coding (904/1683 nt) | ushA | 5'‑nucleotidase/2',3'‑cyclic phosphodiesterase |
? | NC_002947 | 1613794 = | 79 (0.900) | coding (854/1683 nt) | ushA | 5'‑nucleotidase/2',3'‑cyclic phosphodiesterase |
CGAGCCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1613898‑1613744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcaTGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCATTCAC > NC_002947/1613794‑1613942 CGAGCCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGC < 1:1173979/150‑1 CCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATAAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGC > 1:1738166/1‑150 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG < 2:2287190/121‑1 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG < 2:2286834/121‑1 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG > 1:2286834/1‑121 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG > 1:2287190/1‑121 CATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAA > 1:460579/1‑150 ATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTC > 1:2236666/1‑137 ATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTC < 2:2236666/137‑1 GTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCC < 2:460579/150‑1 TGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCAT > 2:1522763/1‑150 TGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCAT > 2:2214095/1‑150 TGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCAT < 2:2393587/150‑1 GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCGTGCGTGTCTAACGGCTCGGCGGTATCCCCTCCCTGGAGGATTACCGCAATGATTGCATT > 1:1943629/1‑150 GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCATT < 1:1249419/150‑1 GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCT > 2:2154030/1‑80 GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCT < 1:2154030/80‑1 ATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCCTGACCGCAATGATTGCATTGAC > 1:318109/1‑150 CGAGCCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1613898‑1613744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcaTGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCATTCAC > NC_002947/1613794‑1613942 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |