| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2281779 = | 89 (0.950) | 6 (0.070) | 5/240 | NT | 6.7% | coding (558/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
| ? | NC_002947 | 2281796 = | 81 (0.900) | coding (575/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase | |||||
AGGCGTCGTGTAGCTGGTAGCCGTGCGTGCCGGCCAGTGCTGCCACCGTCTCTGGCACCCCATGATCCCTGGGCACTGCCAGCGCGCCATGCACGGCATGTGCACCCGCCTCGGCCAGTACAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2281906‑2281779‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCCAGAGACGGTGGCAGCACTGGCCGGCACGCACGGCTACCAGCTACACGACGCCTGCCGTGGCGGTTTCGGAAAATTCGACGATGAGCTACT > NC_002947/2281796‑2281943 AGGCGTCGTGTAGCTGGTAGCCGTGCGTGCCGGCCAGTGCTGCCACCGTCTCTGGCACCCCATGATCCCTGGGCACTGCCAGTGCGCCATGCACGGCATGTGCACCCGCCTCGGCCAGTACAAGGCCG > 1:408813/1‑128AGGCGTCGTGTAGCTGGTAGCCGTGCGTGCCGGCCAGTGCTGCCACCGTCTCTGGCACCCCATGATCCCTGGGCACTGCCAGTGCGCCATGCACGGCATGTGCACCCGCCTCGGCCAGTACAAGGCCG < 2:408813/128‑1 CCGCCTCGGCCAGTACAAGGCCGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCCAGAGACGGTGGCAGCACTGGCCGGCACGCACGGCTACCAGCTACACGACGCCTGCCGTGGCGGTTTCGG > 1:2183575/1‑150 CCGCCTCGGCCAGTACAAGGCCGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGC > 1:448372/1‑80 CCGCCTCGGCCAGTACAAGGCCGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGC < 2:448372/80‑1 GCCTCGGCCAGTACAAGGCCGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCC < 1:1082318/79‑1 GCCTCGGCCAGTACAAGGCCGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCC > 2:1082318/1‑79 TCGGCCAGTACAAGGCCGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCCAGAGACGGTGGCAGCACTGGCCGGCACGCACGGCTACCAGCTACACGACGCCTGCCGTGGCGGTTTCGGAAAAT > 2:771187/1‑150 CCGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCCAGAGACGGTGGCAGCACTGGCCGGCACGCACGGCTACCAGCTACACGACGCCTGCCGTGGCGGTTTCGGAAAATTCGACGATGAGCTAC > 1:1559713/1‑150 CGAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCCAGAGACGGTGGCAGCACTGGCCGGCACGCACGGCTACCAGCTACAAGACGCCTGCCGTGGCGGTTTCGGAAAATTCGACGATGAGCTACT < 2:1047104/150‑1 AGGCGTCGTGTAGCTGGTAGCCGTGCGTGCCGGCCAGTGCTGCCACCGTCTCTGGCACCCCATGATCCCTGGGCACTGCCAGCGCGCCATGCACGGCATGTGCACCCGCCTCGGCCAGTACAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2281906‑2281779‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAGGCGGGTGCACATGCCGTGCATGGCGCGCTGGCAGTGCCCAGGGATCATGGGGTGCCAGAGACGGTGGCAGCACTGGCCGGCACGCACGGCTACCAGCTACACGACGCCTGCCGTGGCGGTTTCGGAAAATTCGACGATGAGCTACT > NC_002947/2281796‑2281943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |