| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3036028 = | 89 (0.950) | 6 (0.070) | 5/242 | NT | 6.9% | coding (426/930 nt) | PP_2648 | universal stress protein family protein |
| ? | NC_002947 | 3036056 = | 77 (0.850) | coding (398/930 nt) | PP_2648 | universal stress protein family protein | |||||
TGGCAGCGCTGCTGTTCCAGCGTTACGGTATCTCCGCTGGCGTGCAGGTCGCCAGCGGCTCGGTGATCACGGAGATCAACCGGGTGGTGCAGGACAAGCACAGCGACCTGCTGGTGTGTGGGGCCAGGGGCCAGAGCGTAGCGCGGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3036179‑3036028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCACGCCAGCGGAGATACCGTAACGCTGGAACAGCAGCGCTGCCAGTGCGTGGGTTTTCTCGCCTGCG > NC_002947/3036056‑3036202 TGGCAGCGCTGCTGTTCCAGCGTTACGGTATCTCCGCTGGCGTGCAGGTCGCCAGCGGCTCGGTGATCACGGAGATCAACCGGGTGGTGCAGGACAAGCACAGCGACCTGCTGGTGTGTGGGGCCAGGGGCCAGAGCGTAGCGCGGCGCC > 1:1037582/1‑150 CCGGGTGGTGCAGGACAAGCACAGCGACCTGCTGGTGTGTGGGGCCAGGGGCCAGAGCGTAGCGCGGCGC < 1:2100095/70‑1 CCGGGTGGTGCAGGACAAGCACAGCGACCTGCTGGTGTGTGGGGCCAGGGGCCAGAGCGTAGCGCGGCGC > 2:2100095/1‑70 GCCAGGGGCCAGAGCGTAGCGCGGCGCCTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCACGCCAGCGGA < 1:656336/122‑1 GCCAGGGGCCAGAGCGTAGCGCGGCGCCTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCACGCCAGCGGA > 2:656336/1‑122 CCAGGGGCCAGAGCGTAGCGCGGCGCCTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCACGCCAGCGGAGATACCGTAACGCTGGAACAGCAGCGCTG > 2:1138619/1‑150 CCAGGGGCCAGAGCGTAGCGCGGCGCCTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCACGCCAGCG < 1:870250/119‑1 CCAGGGGCCAGAGCGTAGCGCGGCGCCTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCACGCCAGCG > 2:870250/1‑119 CAGGGGCCAGAGCGTAGCGCGGCGCCTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCAGCCCGGCGGAGGTACCGTAACGCTGGAACAGCAGCGCTGC > 1:501315/1‑150 CTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGGCGCTGGC‑ACATGGCGCACCATCTTATATACCGTAACGCTGGAACAGCAGCGCTGCCAGTGCGTGGGTTTTCTCGCCTGCG > 1:542392/1‑150 CTGGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGCCAT‑GCGCTCGATTGTAGATACCGGAACGCTGGAACAGCAGCGCTGCCAGTGCGTGGGTTTTCTCGCCTGCG > 1:542567/1‑150 TGGCAGCGCTGCTGTTCCAGCGTTACGGTATCTCCGCTGGCGTGCAGGTCGCCAGCGGCTCGGTGATCACGGAGATCAACCGGGTGGTGCAGGACAAGCACAGCGACCTGCTGGTGTGTGGGGCCAGGGGCCAGAGCGTAGCGCGGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3036179‑3036028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgGCCCCACACACCAGCAGGTCGCTGTGCTTGTCCTGCACCACCCGGTTGATCTCCGTGATCACCGAGCCGCTGGCGACCT‑GCACGCCAGCGGAGATACCGTAACGCTGGAACAGCAGCGCTGCCAGTGCGTGGGTTTTCTCGCCTGCG > NC_002947/3036056‑3036202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |