New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4291194 | 68 (0.730) | 9 (0.100) | 7/234 | NT | 12.5% | coding (1437/3468 nt) | PP_3761 | two‑component system sensor histidine kinase/response regulator |
? | NC_002947 | = 4291207 | 62 (0.710) | coding (1424/3468 nt) | PP_3761 | two‑component system sensor histidine kinase/response regulator |
ATGGATTCGGCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4291039‑4291194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcaggCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAGGAGC < NC_002947/4291207‑4291061 ATGGATTCGGCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGC < 2:2219495/150‑1 TTCGGCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAG > 2:2390777/1‑150 TTCGGCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAG < 1:2136249/150‑1 CCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACGA‑CCTGCA < 1:1412399/150‑1 GCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG < 1:1267938/127‑1 GCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG > 2:1267938/1‑127 CCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGT > 1:1029474/1‑150 TTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACAA‑CCTGCAG > 1:1389466/1‑135 TTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACAA‑CCTGCAG < 2:1389466/135‑1 TGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACGA‑CCTGCA < 1:1205595/93‑1 TGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACGA‑CCTGCA > 2:1205595/1‑93 ATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACGA‑CCTGCAG > 1:1332786/1‑72 ATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACGA‑CCTGCAG < 2:1332786/72‑1 GGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAAC > 2:1029474/1‑150 CTGCAGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAG < 2:1310601/150‑1 CTGCAGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAG < 2:1848271/150‑1 CTGCAGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAG < 1:2213903/150‑1 CTGCAGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAG < 2:2244421/150‑1 GCAGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAGGA > 1:400820/1‑150 CAGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGCGGAG > 2:2431221/1‑150 AGGCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAGGAGC < 1:129422/150‑1 ATGGATTCGGCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAGCTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4291039‑4291194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcaggCCCGTGCCGACGA‑CCTGCAGCGATCGAGCAAGTATAAGTCCGAATTCCTCGCCAACATGTCCCATGAGCTGCGCACGCCGCTCAACAGCTCGCTGATCCTGGCCAAGCTGTTGGCAGAAAACGCTGAAGGCAACCTCAGCGAGGAGC < NC_002947/4291207‑4291061 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |