New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 429119468 (0.730)9 (0.100) 7/234 NT 12.5% coding (1437/3468 nt) PP_3761 two‑component system sensor histidine kinase/response regulator
?NC_002947 = 4291207 62 (0.710)coding (1424/3468 nt) PP_3761 two‑component system sensor histidine kinase/response regulator

Only 100 of 107 total aligned reads displayed.

GGCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTGCGACTCCTTGAG  >  NC_002947/4291047‑4291340
                                                                                                                                                    |                                                                                                                                                   
ggCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGg‑tc                                                                                                                                                  >  1:1444874/1‑150 (MQ=255)
ggCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGg‑tc                                                                                                                                                  >  2:1705367/1‑150 (MQ=255)
  cGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCATAGCGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGg‑tcgt                                                                                                                                                <  1:145516/150‑1 (MQ=255)
   gAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGg‑tcgtc                                                                                                                                               <  1:1026823/150‑1 (MQ=255)
    aaCTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑tcgtcg                                                                                                                                              >  1:841987/1‑150 (MQ=255)
      cTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGAGTACGCACACGCAT‑TCTGTTACTGCGGATGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGc                                                                                                                                            >  1:1475081/1‑150 (MQ=255)
       ttGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCa                                                                                                                                           >  1:1260073/1‑150 (MQ=255)
       ttGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCa                                                                                                                                           >  2:2130737/1‑150 (MQ=255)
        tGACCTGCTCCACGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCAc                                                                                                                                          <  1:2333035/150‑1 (MQ=255)
          aCCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACgg                                                                                                                                        <  1:1661067/150‑1 (MQ=255)
              gCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGcct                                                                                                                                    <  1:129422‑M2/150‑4 (MQ=255)
               ctccgcGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGcctg                                                                                                                                   >  2:2431221‑M2/1‑146 (MQ=255)
                tcctcGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGTCATGATCATGTGTTTGTTAAGGGGCGTGCGCAG‑GTCAGGTGACATGTTGGCTAGTAATTCGGAGTTATCCTTGCTGTATCGCTGGAGG‑TCGTCGGCACGAGCCTGc                                                                                                                                  <  2:1034575/150‑1 (MQ=255)
                 cctcGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacgacctgca                                                                                                                                  <  1:1412399‑M1/150‑20 (MQ=255)
                  ctcGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGcctgcag                                                                                                                                <  2:2244421‑M2/150‑8 (MQ=255)
                  ctcGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGcctgcag                                                                                                                                <  1:2213903‑M2/150‑8 (MQ=255)
                  ctcGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGcctgcag                                                                                                                                <  2:1848271‑M2/150‑8 (MQ=255)
                  ctcGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGcctgcag                                                                                                                                <  2:1310601‑M2/150‑8 (MQ=255)
                     gCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG                                                                                                                                                     <  1:1267938‑M1/127‑1 (MQ=255)
                     gCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG                                                                                                                                                     >  2:1267938‑M1/1‑127 (MQ=255)
                               ccTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacgacctgcagcgatcgagcaagt                                                                                                                    >  1:1029474‑M1/1‑117 (MQ=255)
                                cTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCt                                                                                                                  >  2:1767430/1‑150 (MQ=255)
                                 ttCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacaacctgcag                                                                                                                                 >  1:1389466‑M1/1‑115 (MQ=255)
                                 ttCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacaacctgcag                                                                                                                                 <  2:1389466‑M1/135‑21 (MQ=255)
                                      cGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGGCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGgctca                                                                                                            <  2:1697627/150‑1 (MQ=255)
                                       gTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGCCCGTGCCGACGActgcagcgatcgagcaagtataagtcc                                                                                                             >  2:1029474‑M2/1‑123 (MQ=255)
                                        ttttCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGgctcagc                                                                                                          <  2:1917207/150‑1 (MQ=255)
                                        ttttCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGgctcagc                                                                                                          <  1:2244421/150‑1 (MQ=255)
                                             tGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATc                                                                                                     <  1:2390777/150‑1 (MQ=255)
                                               ccAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGt                                                                                                   >  1:218511/1‑150 (MQ=255)
                                                 aaCAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTCTACTTGATCGATCGCTGCAGG‑TTATCGACACGCTCCTGCAGCTCGAGCTGCGCCTGGCTCAGCTCATCGTTc                                                                                                 >  2:521901/1‑150 (MQ=255)
                                                 aaCAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTc                                                                                                 <  2:1444874/150‑1 (MQ=255)
                                                   cAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCtt                                                                                               <  2:129422/150‑1 (MQ=255)
                                                      cTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCg                                                                                            <  1:2422911/150‑1 (MQ=255)
                                                           ccAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACgg                                                                                                                                        <  1:963961/101‑1 (MQ=255)
                                                           ccAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACgg                                                                                                                                        >  2:963961/1‑101 (MQ=255)
                                                           ccAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCa                                                                                       >  1:380259/1‑150 (MQ=255)
                                                               gATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGCGATTTTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAgcgc                                                                                   >  1:61595/1‑150 (MQ=255)
                                                                  cAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTc                                                                                <  2:218511/150‑1 (MQ=255)
                                                                      gAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTg                                                                            <  1:1848271/150‑1 (MQ=255)
                                                                          tGTTGAGCGGCGTGTGCAG‑CTCAT‑‑GACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCTCTTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTcc                                                                      <  2:17700/150‑1 (MQ=255)
                                                                          tGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacgacctgca                                                                                                                                  <  1:1205595‑M1/93‑20 (MQ=255)
                                                                          tGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacgacctgca                                                                                                                                  >  2:1205595‑M1/1‑74 (MQ=255)
                                                                           gTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTc                                                                       >  1:1325731/1‑150 (MQ=255)
                                                                           gTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTc                                                                       <  1:521901/150‑1 (MQ=255)
                                                                            ttGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTcc                                                                      <  2:690057/150‑1 (MQ=255)
                                                                              gAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGa                                                                    <  2:1396575/150‑1 (MQ=255)
                                                                                gcggcgTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGAGc                                                                                                                                      <  2:2057904/82‑1 (MQ=255)
                                                                                gcggcgTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGAGc                                                                                                                                      >  1:2057904/1‑82 (MQ=255)
                                                                                  ggcgTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAAc                                                                <  1:1705367/150‑1 (MQ=255)
                                                                                   gcgTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACt                                                               >  2:1002184/1‑150 (MQ=255)
                                                                                    cgTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTg                                                              <  1:1310601/150‑1 (MQ=255)
                                                                                         gcAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCt                                                                                                                        <  1:165637/87‑1 (MQ=255)
                                                                                         gcAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCt                                                                                                                        >  2:165637/1‑87 (MQ=255)
                                                                                         gcAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGt                                                         <  1:2130737/150‑1 (MQ=255)
                                                                                           aG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTg                                                       <  1:369526/150‑1 (MQ=255)
                                                                                              cTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGt                                                     >  1:1625405/1‑150 (MQ=255)
                                                                                               tCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTc                                                    >  1:956031/1‑150 (MQ=255)
                                                                                                 aTGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacgacctgcag                                                                                                                                 >  1:1332786‑M1/1‑52 (MQ=255)
                                                                                                 aTGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGGcccgtgccgacgacctgcag                                                                                                                                 <  2:1332786‑M1/72‑21 (MQ=255)
                                                                                                    ggACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGT‑TCGTCGGCACGGGCCTGCAGCTCCa                                                                                                                           <  1:962414/74‑1 (MQ=255)
                                                                                                    ggACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGT‑TCGTCGGCACGGGCCTGCAGCTCCa                                                                                                                           >  2:962414/1‑74 (MQ=255)
                                                                                                      aCATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGa                                             <  1:1767430/150‑1 (MQ=255)
                                                                                                           ttGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCg                                        <  2:2213903/150‑1 (MQ=255)
                                                                                                                gAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGt                                                                         <  1:1920017/112‑1 (MQ=255)
                                                                                                                gAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGt                                                                         >  2:1920017/1‑112 (MQ=255)
                                                                                                                gAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCctg                                   >  2:1117011/1‑150 (MQ=255)
                                                                                                                  ggAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGTCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCctgct                                 <  2:1078428/150‑1 (MQ=255)
                                                                                                                   gAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCctgctg                                <  2:2112763/150‑1 (MQ=255)
                                                                                                                    aagtCGGACTTATACTTGCTCGATCGCGGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCATCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTgg                               <  2:1116514/147‑1 (MQ=255)
                                                                                                                     aTTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTg                                                                                              >  2:2288594/1‑86 (MQ=255)
                                                                                                                     aTTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTg                                                                                              <  1:2288594/86‑1 (MQ=255)
                                                                                                                     aTTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTg                                                                                              <  1:1040410/86‑1 (MQ=255)
                                                                                                                     aTTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTg                                                                                              >  2:1040410/1‑86 (MQ=255)
                                                                                                                     aTTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTggg                              <  2:1475081/150‑1 (MQ=255)
                                                                                                                        cGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTg                                                                                              <  2:172103/83‑1 (MQ=255)
                                                                                                                        cGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTg                                                                                              >  1:172103/1‑83 (MQ=255)
                                                                                                                         ggACTTATACTTGCTCGATCGCTGCAGGtcgtcggcacgggcctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaac                           >  2:1029474‑M1/1‑28 (MQ=255)
                                                                                                                         ggACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCATCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGAGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTc                          >  2:1226564/1‑150 (MQ=255)
                                                                                                                                 aCTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGcctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaagg                  >  1:1029474‑M2/1‑33 (MQ=255)
                                                                                                                                  cTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGc                 >  2:337409/1‑150 (MQ=255)
                                                                                                                                     gCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTg              <  2:841987/150‑1 (MQ=255)
                                                                                                                                     gCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTg              >  1:2433106/1‑150 (MQ=255)
                                                                                                                                      cTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTGc             <  2:2433106/150‑1 (MQ=255)
                                                                                                                                         gATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTGCGAc          >  1:2193835/1‑150 (MQ=255)
                                                                                                                                           tCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTGCGACTc        >  2:1342699/1‑150 (MQ=255)
                                                                                                                                              cTGCAGGcccgtgccgacgacctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgag      <  2:2244421‑M1/150‑144 (MQ=255)
                                                                                                                                              cTGCAGGcccgtgccgacgacctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgag      <  1:2213903‑M1/150‑144 (MQ=255)
                                                                                                                                              cTGCAGGcccgtgccgacgacctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgag      <  2:1848271‑M1/150‑144 (MQ=255)
                                                                                                                                              cTGCAGGcccgtgccgacgacctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgag      <  2:1310601‑M1/150‑144 (MQ=255)
                                                                                                                                              cTGCAGG‑TTGTCGGCACGGGcctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaa                    <  2:1389466‑M2/135‑116 (MQ=255)
                                                                                                                                              cTGCAGG‑TCGTCGGCACGGGcctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccat                                                                                   >  1:1332786‑M2/1‑20 (MQ=255)
                                                                                                                                              cTGCAGG‑TCGTCGGCACGGGcctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccat                                                                                   <  2:1332786‑M2/72‑53 (MQ=255)
                                                                                                                                              cTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTGCGACTCCtt     >  2:1917601/1‑150 (MQ=255)
                                                                                                                                               tGCAGG‑TCGTCGGCACGGGcctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgagg    <  1:1412399‑M2/150‑132 (MQ=255)
                                                                                                                                               tGCAGG‑TCGTCGGCACGGGcctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaaca                                                             <  1:1205595‑M2/93‑75 (MQ=255)
                                                                                                                                                gCAGGcccgtgccgacgacctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgagga    >  1:400820‑M1/1‑5 (MQ=255)
                                                                                                                                                gCAGG‑TCGTCGTCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTTGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTGCGACTCCTTGa   <  2:1260073/150‑1 (MQ=255)
                                                                                                                                                 cAGGcccgtgccgacgacctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgcggag   >  2:2431221‑M1/1‑4 (MQ=255)
                                                                                                                                                  aGGcccgtgccgacgacctgcagcgatcgagcaagtataagtccgaattcctcgccaacatgtcccatgagctgcgcacgccgctcaacagctcgctgatcctggccaagctgttggcagaaaacgctgaaggcaacctcagcgaggagc  <  1:129422‑M1/150‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GGCGAACTTGACCTGCTCCTCGCTGAGGTTGCCTTCAGCGTTTTCTGCCAACAGCTTGGCCAGGATCAGCGAGCTGTTGAGCGGCGTGCGCAG‑CTCATGGGACATGTTGGCGAGGAATTCGGACTTATACTTGCTCGATCGCTGCAGG‑TCGTCGGCACGGGCCTGCAGCTCCAGCTGCGCCTGGCTCAGCTCATCGTTCTTGCGGTCCAGCGCTTCGGTGCGTTCCGACAACTGCTCGTTGGTCTGCTCGAGTTCGGCCTGCTGGGTTTCCAGATGGGCCTGCGACTCCTTGAG  >  NC_002947/4291047‑4291340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.