New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4398703 = | 80 (0.860) | 6 (0.070) | 6/236 | NT | 7.2% | coding (198/1314 nt) | PP_3877 | hypothetical protein |
? | NC_002947 | 4398746 = | 78 (0.890) | coding (155/1314 nt) | PP_3877 | hypothetical protein |
ATGGTCAGATCCAGTCCCTGGCCCAGCTGGAGGCCGCTGGTACTGCGCTC‑AGCGCGGAGCAGCTCTCACAGTTCGAGCAGCTCAGCACCCAGTTCAACCAGCTGACGGAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4398857‑4398703 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagtTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGACCATTGATAGTGGCGCGTTCGCTACGCAATTGAGTTACGA > NC_002947/4398746‑4398893 ATGGTCAGATCCAGTCCCTGGCCCAGCTGGAGGCCGCTGGTACTGCGCTC‑AGCGCGGAGCAGCTCTCACAGTTCGAGCAGCTCAGCACCCAGTTCAACCAGCTGACGGAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCG > 2:1419931/1‑150 TGGTCAGATCCAGTCCCTGGCCCAGCTGGAGTCCGCTGGTACTGC‑CTCTTGCGCTGTGCAGCTCTCACAGTTCGAGCAGCTCAGCACCCAGTTCAACCAGCTGACGGAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGC < 2:1243452/150‑1 GTCAGATCCAGTCCCTGGCCCAGCTGGAGGCCGCTGGTACTGCGCTC‑AGCGCGGAGCAGCTCTCACAGTTCGAGCAGCTCAGCACCCAGTTCAACCAGCTGACGGAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGCGA > 2:955492/1‑150 ATCCAGTCCCTGGCCCAGCTGGAGGCCGCTGGTACTGCGCTC‑AGCGCGGAGCAGCTCTCACAGTTCGAGCAGCTCAGCACCCAGTTCAACCAGCTGACGGAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGngcg < 2:1508301/150‑5 CAACCAGCTGACGGAGAAACTCGCGCGCGCCGAAGTGGCCGAGCGTATGGCGACCGCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTG > 2:1975120/1‑150 GAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAG < 1:711486/143‑1 GAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAG > 2:711486/1‑143 TCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGCTCTGAC > 1:606367/1‑150 GCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGAC < 1:390989/144‑1 GCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGAC > 2:390989/1‑144 CGCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGACCATTGATAGTGGCGCGTTCGCTACGCAATTGAGT < 1:409911/150‑1 GCGAGTTTCTCCGTCAGTTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGACCATTGATAGTGGCGCGTTCGCTACGCAATTGAGTT > 1:190313/1‑150 GCGAGTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGACCATTGATAGTGGCGCGTTCGCTACGCAATTGAGTT > 1:967087/1‑150 GTTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGACCATTGATAGTGGCGCGTTCGCTACGCAATTGAGTTACGA > 2:2297185/1‑150 ATGGTCAGATCCAGTCCCTGGCCCAGCTGGAGGCCGCTGGTACTGCGCTC‑AGCGCGGAGCAGCTCTCACAGTTCGAGCAGCTCAGCACCCAGTTCAACCAGCTGACGGAGAAACTCGCGCGCGCCGAAGCGGCCGAGCGTATGGCGACCGCGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4398857‑4398703 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagtTTCTCCGTCAGCTGGTTGAACTGGGTGCTGAGCTGCTCGAACTGTGAGAGCTGCTCCGCGCTGAGCGCAGTACCAGCGGCCTCCAGCTGGGCCAGGGACTGGATCTGACCATTGATAGTGGCGCGTTCGCTACGCAATTGAGTTACGA > NC_002947/4398746‑4398893 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |