New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4666548 | 112 (1.200) | 7 (0.080) | 9/232 | NT | 6.2% | coding (268/1854 nt) | nuoL | NADH‑quinone oxidoreductase subunit L |
? | NC_002947 | = 4666557 | 109 (1.260) | coding (277/1854 nt) | nuoL | NADH‑quinone oxidoreductase subunit L |
GGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4666391‑4666548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaccaCGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG < NC_002947/4666557‑4666409 GGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTC > 2:1536183/1‑150 TAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGG > 2:2062623/1‑150 TAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGCCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGG > 2:239082/1‑150 AGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGT < 1:1536183/150‑1 CCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCAC < 2:1128274/150‑1 CTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACC < 1:1193293/150‑1 CTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACC > 1:1597444/1‑150 CCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGCCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCATGGTGA < 1:1420202/150‑1 CCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTC < 2:816225/97‑1 CCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTC > 1:816225/1‑97 CTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCATGGTGA > 1:765631/1‑88 CTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCATGGTGA < 2:765631/88‑1 GCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCATGGTGAC < 1:1294595/59‑1 GCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGC‑CGAGCATGGTGAC > 2:1294595/1‑59 GGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCT < 2:1917244/111‑1 GGACGGCCTGTCGGTCACCATGCTCG‑GCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCT > 1:1917244/1‑111 CTGTCGGTCACCATGCTCG‑GCGTGGTGACCGGCAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGG < 1:1625946/102‑1 CTGTCGGTCACCATGCTCG‑GCGTGGTGACCGGCAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGG > 2:1625946/1‑102 CTGTCGGTCACCATGCTCG‑GCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGA > 1:1683642/1‑145 CTGTCGGTCACCATGCTCG‑GCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGA < 2:1683642/145‑1 CGGTCACCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGG > 1:313261/1‑150 CGGTCACCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGG < 1:2056294/150‑1 GTCACCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAA > 1:611246/1‑131 GTCACCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAA < 2:611246/131‑1 GTCACCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCATCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCG > 2:287318/1‑150 CCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCG > 1:172296/1‑150 CCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCG > 1:243956/1‑150 CCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTG > 1:2035207/1‑79 CCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTG < 2:2035207/79‑1 CCACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACAGCCACAGCAGCTGGCTGTACGCGCCGCCCGCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCG > 1:758058/1‑150 CACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGT > 1:819663/1‑150 CACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGT > 1:1164700/1‑150 CACAC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGGCCACCGACATCCACTGCCACAGCAGCTGGCTGTACACGCCGCCCTCAGGCGGGGCGACGCTGAACTGCCAGATGACGTAGGCGGCCGa > 2:148097/1‑149 ACGC‑CGAGCATGGTTACCGACAGGCCTTCCAGGAACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG < 2:957495/150‑1 ACGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG < 1:417514/150‑1 GGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4666391‑4666548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaccaCGC‑CGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG < NC_002947/4666557‑4666409 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |