New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4666548112 (1.200)7 (0.080) 9/232 NT 6.2% coding (268/1854 nt) nuoL NADH‑quinone oxidoreductase subunit L
?NC_002947 = 4666557 109 (1.260)coding (277/1854 nt) nuoL NADH‑quinone oxidoreductase subunit L

GGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4666391‑4666548
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaccaCGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG  <  NC_002947/4666557‑4666409
                                                                                                                                                                                                                                                                                                                    
GGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTC                                                                                                                                                                >  2:1536183/1‑150
  TAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGG                                                                                                                                                              >  2:2062623/1‑150
  TAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGCCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGG                                                                                                                                                              >  2:239082/1‑150
   AGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGT                                                                                                                                                             <  1:1536183/150‑1
      CCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCAC                                                                                                                                                          <  2:1128274/150‑1
       CTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACC                                                                                                                                                         <  1:1193293/150‑1
       CTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACC                                                                                                                                                         >  1:1597444/1‑150
                       CCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGCCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGCCGAGCATGGTGA                                                                                                                                        <  1:1420202/150‑1
                                                     CCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTC                                                                                                                                                                <  2:816225/97‑1
                                                     CCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTC                                                                                                                                                                >  1:816225/1‑97
                                                                                     CTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGCCGAGCATGGTGA                                                                                                                                        >  1:765631/1‑88
                                                                                     CTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGCCGAGCATGGTGA                                                                                                                                        <  2:765631/88‑1
                                                                                                                   GCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGCCGAGCATGGTGAC                                                                                                                                       <  1:1294595/59‑1
                                                                                                                   GCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCACGCCGAGCATGGTGAC                                                                                                                                       >  2:1294595/1‑59
                                                                                                                                          GGACGGCCTGTCGGTCACCATGCTCGGCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCT                                                            <  2:1917244/111‑1
                                                                                                                                          GGACGGCCTGTCGGTCACCATGCTCGGCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCT                                                            >  1:1917244/1‑111
                                                                                                                                                 CTGTCGGTCACCATGCTCGGCGTGGTGACCGGCAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGG                                                              <  1:1625946/102‑1
                                                                                                                                                 CTGTCGGTCACCATGCTCGGCGTGGTGACCGGCAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGG                                                              >  2:1625946/1‑102
                                                                                                                                                 CTGTCGGTCACCATGCTCGGCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGA                   >  1:1683642/1‑145
                                                                                                                                                 CTGTCGGTCACCATGCTCGGCGTGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGA                   <  2:1683642/145‑1
                                                                                                                                                     CGGTCACCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGG          >  1:313261/1‑150
                                                                                                                                                     CGGTCACCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGG          <  1:2056294/150‑1
                                                                                                                                                       GTCACCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAA                           >  1:611246/1‑131
                                                                                                                                                       GTCACCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAA                           <  2:611246/131‑1
                                                                                                                                                       GTCACCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCATCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCG        >  2:287318/1‑150
                                                                                                                                                           CCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCG    >  1:172296/1‑150
                                                                                                                                                           CCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCG    >  1:243956/1‑150
                                                                                                                                                           CCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTG                                                                           >  1:2035207/1‑79
                                                                                                                                                           CCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTG                                                                           <  2:2035207/79‑1
                                                                                                                                                           CCACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACAGCCACAGCAGCTGGCTGTACGCGCCGCCCGCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCG    >  1:758058/1‑150
                                                                                                                                                            CACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGT   >  1:819663/1‑150
                                                                                                                                                            CACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGT   >  1:1164700/1‑150
                                                                                                                                                            CACACCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGGCCACCGACATCCACTGCCACAGCAGCTGGCTGTACACGCCGCCCTCAGGCGGGGCGACGCTGAACTGCCAGATGACGTAGGCGGCCG  >  2:148097/1‑149
                                                                                                                                                             ACGCCGAGCATGGTTACCGACAGGCCTTCCAGGAACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG  <  2:957495/150‑1
                                                                                                                                                             ACGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG  <  1:417514/150‑1
                                                                                                                                                                                                                                                                                                                    
GGTAGGCCTGTCGGCCGCCACGGCCGCCTACGTCATCTGGCAGTTCAACGTCGCCCCGCCTGAGGGCGGCGCGTACAGCCAGCTGCTGTGGCAGTGGATGTCGGTGGACGGCTTCGCGCCGAACTTCACCCTGTACCTGGACGGCCTGTCGGTCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4666391‑4666548
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaccaCGCCGAGCATGGTGACCGACAGGCCGTCCAGGTACAGGGTGAAGTTCGGCGCGAAGCCGTCCACCGACATCCACTGCCACAGCAGCTGGCTGTACGCGCCGCCCTCAGGCGGGGCGACGTTGAACTGCCAGATGACGTAGGCGGCCGTG  <  NC_002947/4666557‑4666409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.